Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN1P18031 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN1P18031 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN1P18031 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.73■□□□□ 0.91
PTPN1P18031 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.73■□□□□ 0.91
PTPN1P18031 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PTPN1P18031 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN1P18031 CR392000.1-201ENST00000624770 1228 ntBASIC20.73■□□□□ 0.91
PTPN1P18031 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN1P18031 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PTPN1P18031 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN1P18031 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPN1P18031 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PTPN1P18031 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PTPN1P18031 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
PTPN1P18031 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN1P18031 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN1P18031 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.72■□□□□ 0.91
PTPN1P18031 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PTPN1P18031 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PTPN1P18031 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN1P18031 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PTPN1P18031 PCDHAC2-203ENST00000615316 3011 ntBASIC20.72■□□□□ 0.91
PTPN1P18031 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN1P18031 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
PTPN1P18031 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN1P18031 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PTPN1P18031 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN1P18031 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN1P18031 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN1P18031 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN1P18031 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN1P18031 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.71■□□□□ 0.91
PTPN1P18031 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PTPN1P18031 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPN1P18031 KRT17P2-201ENST00000300992 1314 ntBASIC20.71■□□□□ 0.91
PTPN1P18031 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN1P18031 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
PTPN1P18031 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PTPN1P18031 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.7■□□□□ 0.91
PTPN1P18031 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
PTPN1P18031 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PTPN1P18031 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PTPN1P18031 AL445675.2-201ENST00000620291 557 ntBASIC20.7■□□□□ 0.9
PTPN1P18031 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.7■□□□□ 0.9
PTPN1P18031 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PTPN1P18031 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PTPN1P18031 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPN1P18031 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN1P18031 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
PTPN1P18031 KRT16P1-201ENST00000399124 1418 ntBASIC20.7■□□□□ 0.9
PTPN1P18031 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN1P18031 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN1P18031 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPN1P18031 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN1P18031 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN1P18031 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPN1P18031 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN1P18031 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN1P18031 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms