Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.01■□□□□ 0.63
PCNAP12004 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.01■□□□□ 0.63
PCNAP12004 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PCNAP12004 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PCNAP12004 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
PCNAP12004 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCNAP12004 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19■□□□□ 0.63
PCNAP12004 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCNAP12004 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCNAP12004 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19■□□□□ 0.63
PCNAP12004 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCNAP12004 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PCNAP12004 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCNAP12004 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19■□□□□ 0.63
PCNAP12004 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19■□□□□ 0.63
PCNAP12004 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCNAP12004 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCNAP12004 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCNAP12004 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19■□□□□ 0.63
PCNAP12004 HES2-206ENST00000489730 730 ntTSL 2 BASIC19■□□□□ 0.63
PCNAP12004 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19■□□□□ 0.63
PCNAP12004 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 AP000974.1-201ENST00000623909 2387 ntBASIC19■□□□□ 0.63
PCNAP12004 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCNAP12004 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.99■□□□□ 0.63
PCNAP12004 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCNAP12004 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.99■□□□□ 0.63
PCNAP12004 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCNAP12004 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCNAP12004 AC120498.9-201ENST00000339021 3867 ntBASIC18.99■□□□□ 0.63
PCNAP12004 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PCNAP12004 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCNAP12004 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.99■□□□□ 0.63
PCNAP12004 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCNAP12004 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCNAP12004 HLA-B-256ENST00000639848 1089 ntBASIC18.99■□□□□ 0.63
PCNAP12004 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.99■□□□□ 0.63
PCNAP12004 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCNAP12004 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCNAP12004 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCNAP12004 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCNAP12004 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCNAP12004 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.99■□□□□ 0.63
PCNAP12004 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.99■□□□□ 0.63
PCNAP12004 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCNAP12004 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.98■□□□□ 0.63
PCNAP12004 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCNAP12004 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.98■□□□□ 0.63
PCNAP12004 AC018553.1-201ENST00000616682 1458 ntBASIC18.98■□□□□ 0.63
PCNAP12004 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.98■□□□□ 0.63
PCNAP12004 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.98■□□□□ 0.63
PCNAP12004 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCNAP12004 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.98■□□□□ 0.63
PCNAP12004 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.98■□□□□ 0.63
PCNAP12004 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.98■□□□□ 0.63
PCNAP12004 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 AC142086.2-201ENST00000569753 217 ntBASIC18.98■□□□□ 0.63
PCNAP12004 AC060766.5-201ENST00000590539 871 ntBASIC18.98■□□□□ 0.63
PCNAP12004 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.98■□□□□ 0.63
PCNAP12004 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCNAP12004 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
PCNAP12004 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCNAP12004 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCNAP12004 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCNAP12004 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCNAP12004 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCNAP12004 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCNAP12004 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.97■□□□□ 0.63
PCNAP12004 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms