Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FREM3P0C091 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.78■□□□□ 0.44
FREM3P0C091 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FREM3P0C091 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM3P0C091 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.78■□□□□ 0.44
FREM3P0C091 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM3P0C091 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.78■□□□□ 0.44
FREM3P0C091 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.78■□□□□ 0.44
FREM3P0C091 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FREM3P0C091 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
FREM3P0C091 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.78■□□□□ 0.44
FREM3P0C091 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FREM3P0C091 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FREM3P0C091 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
FREM3P0C091 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM3P0C091 AC116562.2-201ENST00000507042 360 ntBASIC17.78■□□□□ 0.44
FREM3P0C091 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.78■□□□□ 0.44
FREM3P0C091 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.78■□□□□ 0.44
FREM3P0C091 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.78■□□□□ 0.44
FREM3P0C091 AC116351.2-201ENST00000606540 1585 ntBASIC17.78■□□□□ 0.44
FREM3P0C091 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.78■□□□□ 0.44
FREM3P0C091 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.78■□□□□ 0.44
FREM3P0C091 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FREM3P0C091 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM3P0C091 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM3P0C091 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM3P0C091 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM3P0C091 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FREM3P0C091 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
FREM3P0C091 C2orf69P3-201ENST00000565542 1120 ntBASIC17.77■□□□□ 0.44
FREM3P0C091 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM3P0C091 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.77■□□□□ 0.44
FREM3P0C091 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.77■□□□□ 0.44
FREM3P0C091 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM3P0C091 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM3P0C091 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM3P0C091 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.77■□□□□ 0.44
FREM3P0C091 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
FREM3P0C091 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FREM3P0C091 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
FREM3P0C091 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FREM3P0C091 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.77■□□□□ 0.43
FREM3P0C091 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
FREM3P0C091 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.77■□□□□ 0.43
FREM3P0C091 AF186192.3-201ENST00000583427 947 ntBASIC17.77■□□□□ 0.43
FREM3P0C091 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
FREM3P0C091 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM3P0C091 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM3P0C091 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
FREM3P0C091 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM3P0C091 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM3P0C091 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.76■□□□□ 0.43
FREM3P0C091 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM3P0C091 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FREM3P0C091 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FREM3P0C091 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FREM3P0C091 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM3P0C091 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FREM3P0C091 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM3P0C091 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FREM3P0C091 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.75■□□□□ 0.43
FREM3P0C091 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
FREM3P0C091 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
FREM3P0C091 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.75■□□□□ 0.43
FREM3P0C091 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.75■□□□□ 0.43
FREM3P0C091 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FREM3P0C091 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.75■□□□□ 0.43
FREM3P0C091 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FREM3P0C091 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FREM3P0C091 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FREM3P0C091 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
FREM3P0C091 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.75■□□□□ 0.43
FREM3P0C091 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.75■□□□□ 0.43
FREM3P0C091 AL158211.5-201ENST00000623583 2518 ntBASIC17.75■□□□□ 0.43
FREM3P0C091 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FREM3P0C091 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
FREM3P0C091 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FREM3P0C091 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.75■□□□□ 0.43
FREM3P0C091 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
FREM3P0C091 KRT8P8-201ENST00000434750 1448 ntBASIC17.75■□□□□ 0.43
FREM3P0C091 KSR1P1-201ENST00000446298 240 ntBASIC17.75■□□□□ 0.43
FREM3P0C091 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
FREM3P0C091 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.75■□□□□ 0.43
FREM3P0C091 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FREM3P0C091 AP006587.1-201ENST00000534129 1502 ntBASIC17.75■□□□□ 0.43
FREM3P0C091 HTR7P1-201ENST00000538670 1336 ntBASIC17.75■□□□□ 0.43
FREM3P0C091 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FREM3P0C091 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
FREM3P0C091 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FREM3P0C091 AP001412.1-201ENST00000608405 714 ntBASIC17.75■□□□□ 0.43
FREM3P0C091 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.75■□□□□ 0.43
FREM3P0C091 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
FREM3P0C091 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
FREM3P0C091 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.74■□□□□ 0.43
FREM3P0C091 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.74■□□□□ 0.43
FREM3P0C091 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FREM3P0C091 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.74■□□□□ 0.43
FREM3P0C091 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
FREM3P0C091 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FREM3P0C091 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms