Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TPM1P09493 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TPM1P09493 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TPM1P09493 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
TPM1P09493 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
TPM1P09493 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.51■■□□□ 1.03
TPM1P09493 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 MCRIP2P1-201ENST00000394346 511 ntBASIC21.51■■□□□ 1.03
TPM1P09493 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.51■■□□□ 1.03
TPM1P09493 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TPM1P09493 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.51■■□□□ 1.03
TPM1P09493 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TPM1P09493 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM1P09493 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM1P09493 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TPM1P09493 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.5■■□□□ 1.03
TPM1P09493 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TPM1P09493 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TPM1P09493 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM1P09493 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TPM1P09493 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM1P09493 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
TPM1P09493 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TPM1P09493 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.5■■□□□ 1.03
TPM1P09493 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.5■■□□□ 1.03
TPM1P09493 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.5■■□□□ 1.03
TPM1P09493 AC013268.1-206ENST00000638368 961 ntBASIC21.5■■□□□ 1.03
TPM1P09493 AC112229.1-201ENST00000639295 961 ntBASIC21.5■■□□□ 1.03
TPM1P09493 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM1P09493 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM1P09493 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TPM1P09493 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TPM1P09493 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.5■■□□□ 1.03
TPM1P09493 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
TPM1P09493 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
TPM1P09493 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 AC007322.4-201ENST00000509611 723 ntBASIC21.49■■□□□ 1.03
TPM1P09493 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.49■■□□□ 1.03
TPM1P09493 MFSD11-216ENST00000590393 1141 ntBASIC21.49■■□□□ 1.03
TPM1P09493 AC100791.3-201ENST00000617619 330 ntBASIC21.49■■□□□ 1.03
TPM1P09493 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TPM1P09493 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.49■■□□□ 1.03
TPM1P09493 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TPM1P09493 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TPM1P09493 PHGDH-210ENST00000641115 1638 ntBASIC21.48■■□□□ 1.03
TPM1P09493 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
TPM1P09493 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TPM1P09493 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.48■■□□□ 1.03
TPM1P09493 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.48■■□□□ 1.03
TPM1P09493 AC016405.3-201ENST00000607710 860 ntBASIC21.48■■□□□ 1.03
TPM1P09493 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TPM1P09493 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TPM1P09493 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TPM1P09493 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TPM1P09493 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TPM1P09493 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM1P09493 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TPM1P09493 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms