Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN1P07384 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN1P07384 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CAPN1P07384 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CAPN1P07384 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN1P07384 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN1P07384 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.2■□□□□ 0.66
CAPN1P07384 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN1P07384 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.2■□□□□ 0.66
CAPN1P07384 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPN1P07384 AC233263.1-201ENST00000578059 224 ntBASIC19.2■□□□□ 0.66
CAPN1P07384 AL359736.2-201ENST00000621992 437 ntBASIC19.2■□□□□ 0.66
CAPN1P07384 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CAPN1P07384 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.2■□□□□ 0.66
CAPN1P07384 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN1P07384 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN1P07384 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CAPN1P07384 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN1P07384 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN1P07384 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CAPN1P07384 AC087289.5-201ENST00000586076 3175 ntBASIC19.2■□□□□ 0.66
CAPN1P07384 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN1P07384 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN1P07384 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CAPN1P07384 AC093484.2-201ENST00000580996 2166 ntBASIC19.19■□□□□ 0.66
CAPN1P07384 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN1P07384 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN1P07384 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.19■□□□□ 0.66
CAPN1P07384 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN1P07384 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN1P07384 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN1P07384 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN1P07384 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CAPN1P07384 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN1P07384 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN1P07384 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN1P07384 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.19■□□□□ 0.66
CAPN1P07384 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CAPN1P07384 AP006294.2-201ENST00000641667 209 ntBASIC19.19■□□□□ 0.66
CAPN1P07384 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CAPN1P07384 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN1P07384 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN1P07384 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN1P07384 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN1P07384 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN1P07384 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN1P07384 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CAPN1P07384 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN1P07384 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CAPN1P07384 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN1P07384 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN1P07384 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN1P07384 KRT17P3-201ENST00000420566 1262 ntBASIC19.18■□□□□ 0.66
CAPN1P07384 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN1P07384 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.18■□□□□ 0.66
CAPN1P07384 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.18■□□□□ 0.66
CAPN1P07384 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.18■□□□□ 0.66
CAPN1P07384 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN1P07384 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN1P07384 AP001271.2-201ENST00000624018 1556 ntBASIC19.18■□□□□ 0.66
CAPN1P07384 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN1P07384 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CAPN1P07384 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN1P07384 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CAPN1P07384 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CAPN1P07384 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.17■□□□□ 0.66
CAPN1P07384 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.17■□□□□ 0.66
CAPN1P07384 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN1P07384 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN1P07384 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CAPN1P07384 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CAPN1P07384 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.17■□□□□ 0.66
CAPN1P07384 AC023632.3-201ENST00000521633 145 ntBASIC19.17■□□□□ 0.66
CAPN1P07384 RN7SL471P-201ENST00000580476 299 ntBASIC19.17■□□□□ 0.66
CAPN1P07384 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.17■□□□□ 0.66
CAPN1P07384 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN1P07384 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.17■□□□□ 0.66
CAPN1P07384 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 AC005332.7-201ENST00000614046 2005 ntBASIC19.17■□□□□ 0.66
CAPN1P07384 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN1P07384 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN1P07384 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN1P07384 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN1P07384 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms