Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.57■□□□□ 0.72
APOA4P06727 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.57■□□□□ 0.72
APOA4P06727 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.57■□□□□ 0.72
APOA4P06727 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APOA4P06727 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APOA4P06727 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APOA4P06727 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APOA4P06727 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
APOA4P06727 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.57■□□□□ 0.72
APOA4P06727 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
APOA4P06727 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOA4P06727 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APOA4P06727 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
APOA4P06727 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.56■□□□□ 0.72
APOA4P06727 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOA4P06727 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOA4P06727 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOA4P06727 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.56■□□□□ 0.72
APOA4P06727 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
APOA4P06727 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.56■□□□□ 0.72
APOA4P06727 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.56■□□□□ 0.72
APOA4P06727 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.56■□□□□ 0.72
APOA4P06727 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.56■□□□□ 0.72
APOA4P06727 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
APOA4P06727 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
APOA4P06727 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOA4P06727 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
APOA4P06727 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOA4P06727 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOA4P06727 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.56■□□□□ 0.72
APOA4P06727 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.55■□□□□ 0.72
APOA4P06727 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
APOA4P06727 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
APOA4P06727 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.55■□□□□ 0.72
APOA4P06727 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.55■□□□□ 0.72
APOA4P06727 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
APOA4P06727 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.55■□□□□ 0.72
APOA4P06727 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.55■□□□□ 0.72
APOA4P06727 AC006557.6-201ENST00000623071 864 ntBASIC19.55■□□□□ 0.72
APOA4P06727 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
APOA4P06727 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
APOA4P06727 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.55■□□□□ 0.72
APOA4P06727 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
APOA4P06727 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOA4P06727 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.54■□□□□ 0.72
APOA4P06727 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.54■□□□□ 0.72
APOA4P06727 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
APOA4P06727 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.54■□□□□ 0.72
APOA4P06727 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.54■□□□□ 0.72
APOA4P06727 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.54■□□□□ 0.72
APOA4P06727 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.54■□□□□ 0.72
APOA4P06727 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.54■□□□□ 0.72
APOA4P06727 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.54■□□□□ 0.72
APOA4P06727 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.54■□□□□ 0.72
APOA4P06727 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.54■□□□□ 0.72
APOA4P06727 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
APOA4P06727 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
APOA4P06727 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.54■□□□□ 0.72
APOA4P06727 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.54■□□□□ 0.72
APOA4P06727 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
APOA4P06727 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
APOA4P06727 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.54■□□□□ 0.72
APOA4P06727 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOA4P06727 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.53■□□□□ 0.72
APOA4P06727 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.53■□□□□ 0.72
APOA4P06727 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms