Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.74■□□□□ 0.91
RB1P06400 AC026396.1-201ENST00000419388 421 ntBASIC20.74■□□□□ 0.91
RB1P06400 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RB1P06400 AL136038.3-201ENST00000561909 1096 ntBASIC20.74■□□□□ 0.91
RB1P06400 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.74■□□□□ 0.91
RB1P06400 AL023973.1-201ENST00000624619 620 ntBASIC20.74■□□□□ 0.91
RB1P06400 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RB1P06400 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RB1P06400 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RB1P06400 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.74■□□□□ 0.91
RB1P06400 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.74■□□□□ 0.91
RB1P06400 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RB1P06400 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RB1P06400 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RB1P06400 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RB1P06400 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RB1P06400 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.73■□□□□ 0.91
RB1P06400 AP000523.1-201ENST00000398242 1049 ntBASIC20.73■□□□□ 0.91
RB1P06400 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.73■□□□□ 0.91
RB1P06400 HCG4P8-203ENST00000443049 980 ntBASIC20.73■□□□□ 0.91
RB1P06400 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RB1P06400 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.73■□□□□ 0.91
RB1P06400 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.73■□□□□ 0.91
RB1P06400 AC069148.1-201ENST00000608741 768 ntBASIC20.73■□□□□ 0.91
RB1P06400 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
RB1P06400 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RB1P06400 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RB1P06400 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RB1P06400 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RB1P06400 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RB1P06400 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RB1P06400 AC006128.1-201ENST00000624704 1661 ntBASIC20.73■□□□□ 0.91
RB1P06400 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.73■□□□□ 0.91
RB1P06400 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RB1P06400 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RB1P06400 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RB1P06400 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RB1P06400 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.72■□□□□ 0.91
RB1P06400 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.72■□□□□ 0.91
RB1P06400 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RB1P06400 AC007225.1-201ENST00000566331 1836 ntBASIC20.72■□□□□ 0.91
RB1P06400 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.72■□□□□ 0.91
RB1P06400 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RB1P06400 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.72■□□□□ 0.91
RB1P06400 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.72■□□□□ 0.91
RB1P06400 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.72■□□□□ 0.91
RB1P06400 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RB1P06400 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RB1P06400 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RB1P06400 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RB1P06400 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RB1P06400 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RB1P06400 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.72■□□□□ 0.91
RB1P06400 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RB1P06400 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RB1P06400 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RB1P06400 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RB1P06400 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.71■□□□□ 0.91
RB1P06400 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.71■□□□□ 0.91
RB1P06400 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.71■□□□□ 0.91
RB1P06400 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.71■□□□□ 0.91
RB1P06400 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.71■□□□□ 0.91
RB1P06400 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.71■□□□□ 0.91
RB1P06400 AP003041.3-201ENST00000527151 707 ntBASIC20.71■□□□□ 0.91
RB1P06400 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.71■□□□□ 0.91
RB1P06400 CKBP1-201ENST00000565489 1086 ntBASIC20.71■□□□□ 0.91
RB1P06400 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.71■□□□□ 0.91
RB1P06400 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.71■□□□□ 0.91
RB1P06400 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RB1P06400 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RB1P06400 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RB1P06400 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RB1P06400 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.71■□□□□ 0.91
RB1P06400 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RB1P06400 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RB1P06400 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RB1P06400 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RB1P06400 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.7■□□□□ 0.9
RB1P06400 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.7■□□□□ 0.9
RB1P06400 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RB1P06400 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RB1P06400 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.7■□□□□ 0.9
RB1P06400 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RB1P06400 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.7■□□□□ 0.9
RB1P06400 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RB1P06400 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.7■□□□□ 0.9
RB1P06400 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.7■□□□□ 0.9
RB1P06400 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.7■□□□□ 0.9
RB1P06400 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RB1P06400 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RB1P06400 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RB1P06400 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.7■□□□□ 0.9
RB1P06400 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RB1P06400 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.7■□□□□ 0.9
RB1P06400 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RB1P06400 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RB1P06400 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RB1P06400 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RB1P06400 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RB1P06400 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms