Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 KRASP1-201ENST00000407852 552 ntBASIC19.85■□□□□ 0.77
HLA-DQB2P05538 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DQB2P05538 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 AC093484.2-201ENST00000580996 2166 ntBASIC19.84■□□□□ 0.77
HLA-DQB2P05538 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DQB2P05538 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.83■□□□□ 0.77
HLA-DQB2P05538 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
HLA-DQB2P05538 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQB2P05538 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQB2P05538 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.83■□□□□ 0.77
HLA-DQB2P05538 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQB2P05538 TUBB8P6-201ENST00000436895 1288 ntBASIC19.83■□□□□ 0.77
HLA-DQB2P05538 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.83■□□□□ 0.77
HLA-DQB2P05538 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQB2P05538 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQB2P05538 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQB2P05538 AC124016.1-201ENST00000609552 612 ntBASIC19.83■□□□□ 0.77
HLA-DQB2P05538 ITM2C-210ENST00000620962 501 ntBASIC19.83■□□□□ 0.77
HLA-DQB2P05538 Z82202.1-201ENST00000623446 1880 ntBASIC19.83■□□□□ 0.76
HLA-DQB2P05538 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQB2P05538 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HLA-DQB2P05538 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQB2P05538 KRT8P8-201ENST00000434750 1448 ntBASIC19.83■□□□□ 0.76
HLA-DQB2P05538 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQB2P05538 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQB2P05538 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQB2P05538 AC007952.6-201ENST00000573168 2673 ntBASIC19.82■□□□□ 0.76
HLA-DQB2P05538 AC003957.1-201ENST00000625108 2673 ntBASIC19.82■□□□□ 0.76
HLA-DQB2P05538 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQB2P05538 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 C1QBPP2-201ENST00000528754 825 ntBASIC19.81■□□□□ 0.76
HLA-DQB2P05538 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms