Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFAP04085 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFAP04085 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.27■□□□□ 0.52
PDGFAP04085 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.27■□□□□ 0.52
PDGFAP04085 NTF6B-201ENST00000591913 560 ntBASIC18.27■□□□□ 0.52
PDGFAP04085 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.27■□□□□ 0.52
PDGFAP04085 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFAP04085 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.27■□□□□ 0.52
PDGFAP04085 AC026471.1-201ENST00000564629 3026 ntBASIC18.27■□□□□ 0.51
PDGFAP04085 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDGFAP04085 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PDGFAP04085 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFAP04085 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.26■□□□□ 0.51
PDGFAP04085 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.26■□□□□ 0.51
PDGFAP04085 KRT16P1-201ENST00000399124 1418 ntBASIC18.26■□□□□ 0.51
PDGFAP04085 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.26■□□□□ 0.51
PDGFAP04085 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFAP04085 DUX4L26-201ENST00000489078 1255 ntBASIC18.26■□□□□ 0.51
PDGFAP04085 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFAP04085 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.26■□□□□ 0.51
PDGFAP04085 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.26■□□□□ 0.51
PDGFAP04085 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.26■□□□□ 0.51
PDGFAP04085 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFAP04085 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFAP04085 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFAP04085 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PDGFAP04085 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFAP04085 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFAP04085 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFAP04085 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFAP04085 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFAP04085 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFAP04085 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFAP04085 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.25■□□□□ 0.51
PDGFAP04085 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFAP04085 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
PDGFAP04085 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFAP04085 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.25■□□□□ 0.51
PDGFAP04085 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.25■□□□□ 0.51
PDGFAP04085 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFAP04085 AC010203.1-204ENST00000548782 407 ntBASIC18.25■□□□□ 0.51
PDGFAP04085 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFAP04085 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.25■□□□□ 0.51
PDGFAP04085 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.25■□□□□ 0.51
PDGFAP04085 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFAP04085 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.25■□□□□ 0.51
PDGFAP04085 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFAP04085 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFAP04085 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFAP04085 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDGFAP04085 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.25■□□□□ 0.51
PDGFAP04085 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.25■□□□□ 0.51
PDGFAP04085 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFAP04085 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFAP04085 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
PDGFAP04085 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFAP04085 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFAP04085 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFAP04085 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.24■□□□□ 0.51
PDGFAP04085 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFAP04085 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.24■□□□□ 0.51
PDGFAP04085 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.24■□□□□ 0.51
PDGFAP04085 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.24■□□□□ 0.51
PDGFAP04085 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.24■□□□□ 0.51
PDGFAP04085 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.24■□□□□ 0.51
PDGFAP04085 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.24■□□□□ 0.51
PDGFAP04085 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.24■□□□□ 0.51
PDGFAP04085 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFAP04085 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFAP04085 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFAP04085 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFAP04085 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.24■□□□□ 0.51
PDGFAP04085 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PDGFAP04085 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.24■□□□□ 0.51
PDGFAP04085 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFAP04085 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFAP04085 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDGFAP04085 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.23■□□□□ 0.51
PDGFAP04085 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.23■□□□□ 0.51
PDGFAP04085 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFAP04085 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFAP04085 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFAP04085 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.23■□□□□ 0.51
PDGFAP04085 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFAP04085 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFAP04085 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFAP04085 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDGFAP04085 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDGFAP04085 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.23■□□□□ 0.51
PDGFAP04085 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.23■□□□□ 0.51
PDGFAP04085 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.23■□□□□ 0.51
PDGFAP04085 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PDGFAP04085 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.23■□□□□ 0.51
PDGFAP04085 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.23■□□□□ 0.51
PDGFAP04085 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PDGFAP04085 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFAP04085 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFAP04085 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.23■□□□□ 0.51
PDGFAP04085 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PDGFAP04085 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms