Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1O96005 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1O96005 AC009237.3-201ENST00000393279 1427 ntBASIC18.4■□□□□ 0.54
CLPTM1O96005 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CLPTM1O96005 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1O96005 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1O96005 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1O96005 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.4■□□□□ 0.54
CLPTM1O96005 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLPTM1O96005 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1O96005 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CLPTM1O96005 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.4■□□□□ 0.54
CLPTM1O96005 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1O96005 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLPTM1O96005 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLPTM1O96005 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1O96005 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1O96005 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLPTM1O96005 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.4■□□□□ 0.54
CLPTM1O96005 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1O96005 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLPTM1O96005 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLPTM1O96005 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1O96005 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1O96005 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.4■□□□□ 0.54
CLPTM1O96005 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1O96005 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.4■□□□□ 0.54
CLPTM1O96005 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CLPTM1O96005 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLPTM1O96005 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CLPTM1O96005 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.39■□□□□ 0.53
CLPTM1O96005 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.39■□□□□ 0.53
CLPTM1O96005 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLPTM1O96005 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.39■□□□□ 0.53
CLPTM1O96005 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLPTM1O96005 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.39■□□□□ 0.53
CLPTM1O96005 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 AL162430.1-201ENST00000480705 870 ntBASIC18.39■□□□□ 0.53
CLPTM1O96005 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.39■□□□□ 0.53
CLPTM1O96005 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLPTM1O96005 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.39■□□□□ 0.53
CLPTM1O96005 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLPTM1O96005 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLPTM1O96005 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLPTM1O96005 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1O96005 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CLPTM1O96005 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLPTM1O96005 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.38■□□□□ 0.53
CLPTM1O96005 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.38■□□□□ 0.53
CLPTM1O96005 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLPTM1O96005 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.38■□□□□ 0.53
CLPTM1O96005 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.38■□□□□ 0.53
CLPTM1O96005 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.38■□□□□ 0.53
CLPTM1O96005 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.38■□□□□ 0.53
CLPTM1O96005 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.38■□□□□ 0.53
CLPTM1O96005 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 AC090164.3-201ENST00000610780 2143 ntBASIC18.38■□□□□ 0.53
CLPTM1O96005 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CLPTM1O96005 AC012313.1-201ENST00000593393 3059 ntBASIC18.38■□□□□ 0.53
CLPTM1O96005 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLPTM1O96005 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.38■□□□□ 0.53
CLPTM1O96005 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLPTM1O96005 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLPTM1O96005 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPTM1O96005 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.37■□□□□ 0.53
CLPTM1O96005 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms