Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GGPS1O95749 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.97■■□□□ 1.11
GGPS1O95749 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GGPS1O95749 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
GGPS1O95749 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.97■■□□□ 1.11
GGPS1O95749 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
GGPS1O95749 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
GGPS1O95749 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.97■■□□□ 1.11
GGPS1O95749 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.97■■□□□ 1.11
GGPS1O95749 RN7SL850P-201ENST00000579959 291 ntBASIC21.97■■□□□ 1.11
GGPS1O95749 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.97■■□□□ 1.11
GGPS1O95749 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.97■■□□□ 1.11
GGPS1O95749 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GGPS1O95749 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.97■■□□□ 1.11
GGPS1O95749 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
GGPS1O95749 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
GGPS1O95749 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
GGPS1O95749 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GGPS1O95749 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.97■■□□□ 1.11
GGPS1O95749 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GGPS1O95749 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
GGPS1O95749 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
GGPS1O95749 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.96■■□□□ 1.11
GGPS1O95749 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.96■■□□□ 1.11
GGPS1O95749 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GGPS1O95749 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GGPS1O95749 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
GGPS1O95749 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.96■■□□□ 1.11
GGPS1O95749 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.96■■□□□ 1.11
GGPS1O95749 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GGPS1O95749 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.96■■□□□ 1.11
GGPS1O95749 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.96■■□□□ 1.11
GGPS1O95749 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
GGPS1O95749 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.96■■□□□ 1.11
GGPS1O95749 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.96■■□□□ 1.11
GGPS1O95749 DGCR10-201ENST00000609839 495 ntBASIC21.96■■□□□ 1.11
GGPS1O95749 AC005363.2-201ENST00000618631 242 ntBASIC21.96■■□□□ 1.11
GGPS1O95749 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GGPS1O95749 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.96■■□□□ 1.11
GGPS1O95749 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GGPS1O95749 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GGPS1O95749 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
GGPS1O95749 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.96■■□□□ 1.11
GGPS1O95749 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
GGPS1O95749 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.95■■□□□ 1.11
GGPS1O95749 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.95■■□□□ 1.1
GGPS1O95749 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.95■■□□□ 1.1
GGPS1O95749 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
GGPS1O95749 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GGPS1O95749 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GGPS1O95749 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GGPS1O95749 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GGPS1O95749 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GGPS1O95749 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GGPS1O95749 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GGPS1O95749 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GGPS1O95749 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.95■■□□□ 1.1
GGPS1O95749 TMPOP1-202ENST00000424642 1267 ntBASIC21.95■■□□□ 1.1
GGPS1O95749 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.95■■□□□ 1.1
GGPS1O95749 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.95■■□□□ 1.1
GGPS1O95749 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.95■■□□□ 1.1
GGPS1O95749 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
GGPS1O95749 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GGPS1O95749 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GGPS1O95749 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GGPS1O95749 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.95■■□□□ 1.1
GGPS1O95749 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.95■■□□□ 1.1
GGPS1O95749 KRT8P8-201ENST00000434750 1448 ntBASIC21.95■■□□□ 1.1
GGPS1O95749 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.95■■□□□ 1.1
GGPS1O95749 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GGPS1O95749 LINC01006-201ENST00000333319 2292 ntBASIC21.95■■□□□ 1.1
GGPS1O95749 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.95■■□□□ 1.1
GGPS1O95749 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
GGPS1O95749 AL391422.3-201ENST00000603791 2761 ntBASIC21.94■■□□□ 1.1
GGPS1O95749 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
GGPS1O95749 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
GGPS1O95749 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
GGPS1O95749 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.94■■□□□ 1.1
GGPS1O95749 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
GGPS1O95749 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.94■■□□□ 1.1
GGPS1O95749 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.94■■□□□ 1.1
GGPS1O95749 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.94■■□□□ 1.1
GGPS1O95749 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
GGPS1O95749 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 RCC2P6-201ENST00000526625 1557 ntBASIC21.94■■□□□ 1.1
GGPS1O95749 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
GGPS1O95749 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms