Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG5O95196 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.98■□□□□ 0.95
CSPG5O95196 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSPG5O95196 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.97■□□□□ 0.95
CSPG5O95196 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG5O95196 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG5O95196 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.97■□□□□ 0.95
CSPG5O95196 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.97■□□□□ 0.95
CSPG5O95196 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG5O95196 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.97■□□□□ 0.95
CSPG5O95196 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG5O95196 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG5O95196 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG5O95196 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG5O95196 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG5O95196 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.97■□□□□ 0.95
CSPG5O95196 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CSPG5O95196 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.97■□□□□ 0.95
CSPG5O95196 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.97■□□□□ 0.95
CSPG5O95196 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.97■□□□□ 0.95
CSPG5O95196 AC011298.2-201ENST00000617989 482 ntBASIC20.97■□□□□ 0.95
CSPG5O95196 AC131212.4-201ENST00000623606 975 ntBASIC20.97■□□□□ 0.95
CSPG5O95196 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.97■□□□□ 0.95
CSPG5O95196 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.97■□□□□ 0.95
CSPG5O95196 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CSPG5O95196 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG5O95196 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CSPG5O95196 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG5O95196 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSPG5O95196 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CSPG5O95196 AC018553.1-201ENST00000616682 1458 ntBASIC20.96■□□□□ 0.95
CSPG5O95196 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.96■□□□□ 0.95
CSPG5O95196 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG5O95196 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG5O95196 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.96■□□□□ 0.95
CSPG5O95196 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.96■□□□□ 0.95
CSPG5O95196 TUBB8P6-201ENST00000436895 1288 ntBASIC20.96■□□□□ 0.95
CSPG5O95196 BX664615.1-201ENST00000443558 458 ntBASIC20.96■□□□□ 0.95
CSPG5O95196 DGCR10-201ENST00000609839 495 ntBASIC20.96■□□□□ 0.95
CSPG5O95196 AC093458.2-201ENST00000623150 629 ntBASIC20.96■□□□□ 0.95
CSPG5O95196 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.96■□□□□ 0.95
CSPG5O95196 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG5O95196 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CSPG5O95196 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CSPG5O95196 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CSPG5O95196 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSPG5O95196 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CSPG5O95196 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CSPG5O95196 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.95■□□□□ 0.94
CSPG5O95196 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG5O95196 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG5O95196 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CSPG5O95196 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CSPG5O95196 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.95■□□□□ 0.94
CSPG5O95196 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CSPG5O95196 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CSPG5O95196 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG5O95196 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.95■□□□□ 0.94
CSPG5O95196 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG5O95196 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.95■□□□□ 0.94
CSPG5O95196 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.95■□□□□ 0.94
CSPG5O95196 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.95■□□□□ 0.94
CSPG5O95196 AC092647.4-201ENST00000457211 535 ntBASIC20.95■□□□□ 0.94
CSPG5O95196 AC063952.2-201ENST00000498792 1227 ntBASIC20.95■□□□□ 0.94
CSPG5O95196 KRT18P56-201ENST00000507275 550 ntBASIC20.95■□□□□ 0.94
CSPG5O95196 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CSPG5O95196 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.95■□□□□ 0.94
CSPG5O95196 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG5O95196 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG5O95196 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG5O95196 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG5O95196 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CSPG5O95196 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CSPG5O95196 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG5O95196 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG5O95196 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CSPG5O95196 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG5O95196 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSPG5O95196 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSPG5O95196 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSPG5O95196 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CSPG5O95196 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.94■□□□□ 0.94
CSPG5O95196 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.94■□□□□ 0.94
CSPG5O95196 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSPG5O95196 AC008040.2-201ENST00000461049 708 ntBASIC20.94■□□□□ 0.94
CSPG5O95196 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.94■□□□□ 0.94
CSPG5O95196 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CSPG5O95196 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSPG5O95196 FEM1AP4-201ENST00000443167 1987 ntBASIC20.94■□□□□ 0.94
CSPG5O95196 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.93■□□□□ 0.94
CSPG5O95196 RCC2P6-201ENST00000526625 1557 ntBASIC20.93■□□□□ 0.94
CSPG5O95196 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSPG5O95196 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CSPG5O95196 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSPG5O95196 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSPG5O95196 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSPG5O95196 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
CSPG5O95196 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSPG5O95196 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CSPG5O95196 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms