Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.24■□□□□ 0.35
ALX3O95076 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
ALX3O95076 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX3O95076 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX3O95076 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ALX3O95076 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.24■□□□□ 0.35
ALX3O95076 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX3O95076 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ALX3O95076 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.24■□□□□ 0.35
ALX3O95076 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.24■□□□□ 0.35
ALX3O95076 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALX3O95076 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.23■□□□□ 0.35
ALX3O95076 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ALX3O95076 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ALX3O95076 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.23■□□□□ 0.35
ALX3O95076 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ALX3O95076 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ALX3O95076 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.23■□□□□ 0.35
ALX3O95076 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 AC034268.1-201ENST00000441047 882 ntBASIC17.23■□□□□ 0.35
ALX3O95076 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.23■□□□□ 0.35
ALX3O95076 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.23■□□□□ 0.35
ALX3O95076 NTF6G-201ENST00000591094 616 ntBASIC17.23■□□□□ 0.35
ALX3O95076 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ALX3O95076 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.23■□□□□ 0.35
ALX3O95076 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.23■□□□□ 0.35
ALX3O95076 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.23■□□□□ 0.35
ALX3O95076 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.23■□□□□ 0.35
ALX3O95076 TNRC18P3-201ENST00000441896 2691 ntBASIC17.23■□□□□ 0.35
ALX3O95076 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX3O95076 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.23■□□□□ 0.35
ALX3O95076 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
ALX3O95076 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ALX3O95076 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ALX3O95076 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.22■□□□□ 0.35
ALX3O95076 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.22■□□□□ 0.35
ALX3O95076 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.22■□□□□ 0.35
ALX3O95076 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.22■□□□□ 0.35
ALX3O95076 AC022517.1-201ENST00000592429 346 ntBASIC17.22■□□□□ 0.35
ALX3O95076 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ALX3O95076 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.22■□□□□ 0.35
ALX3O95076 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX3O95076 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.22■□□□□ 0.35
ALX3O95076 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.21■□□□□ 0.35
ALX3O95076 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ALX3O95076 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ALX3O95076 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.21■□□□□ 0.35
ALX3O95076 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 AC009237.14-201ENST00000609975 1594 ntBASIC17.21■□□□□ 0.35
ALX3O95076 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.21■□□□□ 0.35
ALX3O95076 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ALX3O95076 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.21■□□□□ 0.35
ALX3O95076 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ALX3O95076 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.21■□□□□ 0.35
ALX3O95076 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX3O95076 PTBP1P-201ENST00000554374 1601 ntBASIC17.21■□□□□ 0.35
ALX3O95076 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ALX3O95076 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms