Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AC026366.1-201ENST00000488803 879 ntBASIC18.82■□□□□ 0.6
PRAMEF4O60810 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF4O60810 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF4O60810 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEF4O60810 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRAMEF4O60810 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEF4O60810 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.81■□□□□ 0.6
PRAMEF4O60810 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF4O60810 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.81■□□□□ 0.6
PRAMEF4O60810 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.81■□□□□ 0.6
PRAMEF4O60810 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEF4O60810 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF4O60810 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEF4O60810 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 YBX1P10-201ENST00000444752 975 ntBASIC18.8■□□□□ 0.6
PRAMEF4O60810 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF4O60810 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PRAMEF4O60810 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRAMEF4O60810 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF4O60810 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF4O60810 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF4O60810 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PRAMEF4O60810 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF4O60810 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF4O60810 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF4O60810 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF4O60810 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF4O60810 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF4O60810 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
PRAMEF4O60810 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.79■□□□□ 0.6
PRAMEF4O60810 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF4O60810 KRT18P16-201ENST00000510337 1294 ntBASIC18.79■□□□□ 0.6
PRAMEF4O60810 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.79■□□□□ 0.6
PRAMEF4O60810 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF4O60810 MIR4651-201ENST00000582622 73 ntBASIC18.79■□□□□ 0.6
PRAMEF4O60810 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF4O60810 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF4O60810 MTDHP1-201ENST00000605323 784 ntBASIC18.79■□□□□ 0.6
PRAMEF4O60810 AC069544.1-201ENST00000609399 999 ntBASIC18.79■□□□□ 0.6
PRAMEF4O60810 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF4O60810 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms