Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHL41O60662 AC093787.1-201ENST00000450396 207 ntBASIC19.35■□□□□ 0.69
KLHL41O60662 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.35■□□□□ 0.69
KLHL41O60662 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.35■□□□□ 0.69
KLHL41O60662 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KLHL41O60662 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHL41O60662 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHL41O60662 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHL41O60662 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.35■□□□□ 0.69
KLHL41O60662 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KLHL41O60662 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHL41O60662 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
KLHL41O60662 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.35■□□□□ 0.69
KLHL41O60662 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.35■□□□□ 0.69
KLHL41O60662 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
KLHL41O60662 AC010980.2-201ENST00000587099 1412 ntBASIC19.34■□□□□ 0.69
KLHL41O60662 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.34■□□□□ 0.69
KLHL41O60662 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.34■□□□□ 0.69
KLHL41O60662 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.34■□□□□ 0.69
KLHL41O60662 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
KLHL41O60662 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
KLHL41O60662 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.34■□□□□ 0.69
KLHL41O60662 AC100791.3-201ENST00000617619 330 ntBASIC19.34■□□□□ 0.69
KLHL41O60662 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.34■□□□□ 0.69
KLHL41O60662 AP006294.2-201ENST00000641667 209 ntBASIC19.34■□□□□ 0.69
KLHL41O60662 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
KLHL41O60662 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.34■□□□□ 0.69
KLHL41O60662 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KLHL41O60662 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KLHL41O60662 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.33■□□□□ 0.69
KLHL41O60662 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
KLHL41O60662 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.33■□□□□ 0.69
KLHL41O60662 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
KLHL41O60662 NEFHP1-201ENST00000412845 2629 ntBASIC19.33■□□□□ 0.69
KLHL41O60662 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.33■□□□□ 0.69
KLHL41O60662 AC020763.4-201ENST00000623414 4170 ntBASIC19.33■□□□□ 0.69
KLHL41O60662 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KLHL41O60662 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KLHL41O60662 LSM12P1-201ENST00000411836 588 ntBASIC19.33■□□□□ 0.68
KLHL41O60662 AC091874.3-201ENST00000512672 1195 ntBASIC19.33■□□□□ 0.68
KLHL41O60662 AC098934.4-201ENST00000564127 592 ntBASIC19.33■□□□□ 0.68
KLHL41O60662 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.33■□□□□ 0.68
KLHL41O60662 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KLHL41O60662 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
KLHL41O60662 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KLHL41O60662 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KLHL41O60662 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KLHL41O60662 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KLHL41O60662 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
KLHL41O60662 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.32■□□□□ 0.68
KLHL41O60662 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.32■□□□□ 0.68
KLHL41O60662 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.32■□□□□ 0.68
KLHL41O60662 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.32■□□□□ 0.68
KLHL41O60662 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
KLHL41O60662 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
KLHL41O60662 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.32■□□□□ 0.68
KLHL41O60662 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.32■□□□□ 0.68
KLHL41O60662 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
KLHL41O60662 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.32■□□□□ 0.68
KLHL41O60662 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.32■□□□□ 0.68
KLHL41O60662 MYC-209ENST00000641252 345 ntBASIC19.32■□□□□ 0.68
KLHL41O60662 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
KLHL41O60662 AL032819.2-201ENST00000624543 2162 ntBASIC19.32■□□□□ 0.68
KLHL41O60662 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KLHL41O60662 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.32■□□□□ 0.68
KLHL41O60662 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.31■□□□□ 0.68
KLHL41O60662 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KLHL41O60662 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KLHL41O60662 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KLHL41O60662 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.31■□□□□ 0.68
KLHL41O60662 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KLHL41O60662 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
KLHL41O60662 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
KLHL41O60662 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms