Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.22■■□□□ 1.15
CCNT1O60563 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CCNT1O60563 GCSHP5-201ENST00000443090 522 ntBASIC22.22■■□□□ 1.15
CCNT1O60563 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CCNT1O60563 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
CCNT1O60563 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.22■■□□□ 1.15
CCNT1O60563 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.22■■□□□ 1.15
CCNT1O60563 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CCNT1O60563 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.22■■□□□ 1.15
CCNT1O60563 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.22■■□□□ 1.15
CCNT1O60563 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNT1O60563 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CCNT1O60563 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.22■■□□□ 1.15
CCNT1O60563 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNT1O60563 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNT1O60563 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNT1O60563 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNT1O60563 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCNT1O60563 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CCNT1O60563 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.21■■□□□ 1.15
CCNT1O60563 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCNT1O60563 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNT1O60563 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.21■■□□□ 1.15
CCNT1O60563 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCNT1O60563 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.21■■□□□ 1.15
CCNT1O60563 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.21■■□□□ 1.15
CCNT1O60563 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNT1O60563 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNT1O60563 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CCNT1O60563 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.21■■□□□ 1.15
CCNT1O60563 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CCNT1O60563 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNT1O60563 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNT1O60563 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
CCNT1O60563 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNT1O60563 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNT1O60563 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.21■■□□□ 1.15
CCNT1O60563 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CCNT1O60563 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.21■■□□□ 1.15
CCNT1O60563 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CCNT1O60563 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CCNT1O60563 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.2■■□□□ 1.14
CCNT1O60563 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.2■■□□□ 1.14
CCNT1O60563 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.2■■□□□ 1.14
CCNT1O60563 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.2■■□□□ 1.14
CCNT1O60563 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.2■■□□□ 1.14
CCNT1O60563 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNT1O60563 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.19■■□□□ 1.14
CCNT1O60563 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCNT1O60563 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCNT1O60563 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCNT1O60563 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.19■■□□□ 1.14
CCNT1O60563 KRT16P5-201ENST00000455284 522 ntBASIC22.19■■□□□ 1.14
CCNT1O60563 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.19■■□□□ 1.14
CCNT1O60563 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.19■■□□□ 1.14
CCNT1O60563 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.19■■□□□ 1.14
CCNT1O60563 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.19■■□□□ 1.14
CCNT1O60563 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCNT1O60563 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.19■■□□□ 1.14
CCNT1O60563 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.19■■□□□ 1.14
CCNT1O60563 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCNT1O60563 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCNT1O60563 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCNT1O60563 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.19■■□□□ 1.14
CCNT1O60563 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.19■■□□□ 1.14
CCNT1O60563 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.18■■□□□ 1.14
CCNT1O60563 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCNT1O60563 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCNT1O60563 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCNT1O60563 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCNT1O60563 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.18■■□□□ 1.14
CCNT1O60563 KRT8P8-201ENST00000434750 1448 ntBASIC22.18■■□□□ 1.14
CCNT1O60563 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCNT1O60563 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCNT1O60563 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CCNT1O60563 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCNT1O60563 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCNT1O60563 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.18■■□□□ 1.14
CCNT1O60563 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.18■■□□□ 1.14
CCNT1O60563 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.18■■□□□ 1.14
CCNT1O60563 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCNT1O60563 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCNT1O60563 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCNT1O60563 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CCNT1O60563 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNT1O60563 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.17■■□□□ 1.14
CCNT1O60563 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.17■■□□□ 1.14
CCNT1O60563 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms