Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MSI1O43347 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSI1O43347 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MSI1O43347 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MSI1O43347 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MSI1O43347 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
MSI1O43347 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSI1O43347 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.34■□□□□ 0.85
MSI1O43347 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MSI1O43347 AP002982.1-201ENST00000492365 877 ntBASIC20.34■□□□□ 0.85
MSI1O43347 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.34■□□□□ 0.85
MSI1O43347 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.34■□□□□ 0.85
MSI1O43347 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSI1O43347 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MSI1O43347 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.34■□□□□ 0.85
MSI1O43347 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSI1O43347 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSI1O43347 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.34■□□□□ 0.85
MSI1O43347 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.34■□□□□ 0.85
MSI1O43347 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSI1O43347 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
MSI1O43347 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSI1O43347 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.33■□□□□ 0.85
MSI1O43347 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSI1O43347 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.33■□□□□ 0.85
MSI1O43347 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
MSI1O43347 FAM197Y1-201ENST00000421178 764 ntBASIC20.33■□□□□ 0.85
MSI1O43347 AL353807.1-201ENST00000427475 662 ntBASIC20.33■□□□□ 0.85
MSI1O43347 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MSI1O43347 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.33■□□□□ 0.85
MSI1O43347 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.33■□□□□ 0.85
MSI1O43347 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.33■□□□□ 0.85
MSI1O43347 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.33■□□□□ 0.85
MSI1O43347 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSI1O43347 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.33■□□□□ 0.85
MSI1O43347 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.33■□□□□ 0.84
MSI1O43347 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.33■□□□□ 0.84
MSI1O43347 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.33■□□□□ 0.84
MSI1O43347 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
MSI1O43347 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
MSI1O43347 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.33■□□□□ 0.84
MSI1O43347 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.33■□□□□ 0.84
MSI1O43347 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MSI1O43347 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSI1O43347 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.32■□□□□ 0.84
MSI1O43347 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSI1O43347 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSI1O43347 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSI1O43347 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.32■□□□□ 0.84
MSI1O43347 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MSI1O43347 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MSI1O43347 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.32■□□□□ 0.84
MSI1O43347 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.32■□□□□ 0.84
MSI1O43347 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.32■□□□□ 0.84
MSI1O43347 MIR4497-201ENST00000583208 89 ntBASIC20.32■□□□□ 0.84
MSI1O43347 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.32■□□□□ 0.84
MSI1O43347 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSI1O43347 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MSI1O43347 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSI1O43347 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSI1O43347 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
MSI1O43347 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSI1O43347 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSI1O43347 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.32■□□□□ 0.84
MSI1O43347 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSI1O43347 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.31■□□□□ 0.84
MSI1O43347 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSI1O43347 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
MSI1O43347 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSI1O43347 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.31■□□□□ 0.84
MSI1O43347 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSI1O43347 AFG3L1P-217ENST00000557444 2447 ntBASIC20.31■□□□□ 0.84
MSI1O43347 NIFKP9-201ENST00000419265 221 ntBASIC20.31■□□□□ 0.84
MSI1O43347 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.31■□□□□ 0.84
MSI1O43347 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MSI1O43347 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.31■□□□□ 0.84
MSI1O43347 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MSI1O43347 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MSI1O43347 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MSI1O43347 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSI1O43347 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MSI1O43347 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSI1O43347 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MSI1O43347 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.3■□□□□ 0.84
MSI1O43347 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSI1O43347 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MSI1O43347 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MSI1O43347 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.3■□□□□ 0.84
MSI1O43347 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.3■□□□□ 0.84
MSI1O43347 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
MSI1O43347 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.3■□□□□ 0.84
MSI1O43347 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.3■□□□□ 0.84
MSI1O43347 CD177P1-201ENST00000606252 935 ntBASIC20.3■□□□□ 0.84
MSI1O43347 AP001412.1-201ENST00000608405 714 ntBASIC20.3■□□□□ 0.84
MSI1O43347 AL353708.3-201ENST00000610272 989 ntBASIC20.3■□□□□ 0.84
MSI1O43347 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.3■□□□□ 0.84
MSI1O43347 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.3■□□□□ 0.84
MSI1O43347 AC125437.2-201ENST00000625180 2167 ntBASIC20.29■□□□□ 0.84
MSI1O43347 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
MSI1O43347 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms