Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHF1O43189 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHF1O43189 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHF1O43189 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.86■□□□□ 0.29
PHF1O43189 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PHF1O43189 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHF1O43189 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHF1O43189 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
PHF1O43189 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PHF1O43189 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHF1O43189 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.86■□□□□ 0.29
PHF1O43189 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHF1O43189 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHF1O43189 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.86■□□□□ 0.29
PHF1O43189 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.86■□□□□ 0.29
PHF1O43189 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.86■□□□□ 0.29
PHF1O43189 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHF1O43189 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PHF1O43189 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.86■□□□□ 0.29
PHF1O43189 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PHF1O43189 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.86■□□□□ 0.29
PHF1O43189 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHF1O43189 KRT17P2-201ENST00000300992 1314 ntBASIC16.86■□□□□ 0.29
PHF1O43189 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.86■□□□□ 0.29
PHF1O43189 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.86■□□□□ 0.29
PHF1O43189 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHF1O43189 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHF1O43189 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHF1O43189 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PHF1O43189 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PHF1O43189 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHF1O43189 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.85■□□□□ 0.29
PHF1O43189 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.85■□□□□ 0.29
PHF1O43189 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHF1O43189 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHF1O43189 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHF1O43189 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHF1O43189 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PHF1O43189 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PHF1O43189 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHF1O43189 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.85■□□□□ 0.29
PHF1O43189 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHF1O43189 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.85■□□□□ 0.29
PHF1O43189 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.85■□□□□ 0.29
PHF1O43189 PNMA6B-201ENST00000538162 1200 ntBASIC16.85■□□□□ 0.29
PHF1O43189 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHF1O43189 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.85■□□□□ 0.29
PHF1O43189 AL445228.2-201ENST00000605589 952 ntBASIC16.85■□□□□ 0.29
PHF1O43189 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHF1O43189 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHF1O43189 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.85■□□□□ 0.29
PHF1O43189 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHF1O43189 AC116562.4-201ENST00000641316 2276 ntBASIC16.85■□□□□ 0.29
PHF1O43189 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PHF1O43189 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHF1O43189 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PHF1O43189 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.85■□□□□ 0.29
PHF1O43189 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHF1O43189 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF1O43189 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.84■□□□□ 0.29
PHF1O43189 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF1O43189 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PHF1O43189 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF1O43189 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF1O43189 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF1O43189 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF1O43189 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.84■□□□□ 0.29
PHF1O43189 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.84■□□□□ 0.29
PHF1O43189 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.84■□□□□ 0.29
PHF1O43189 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.84■□□□□ 0.29
PHF1O43189 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.84■□□□□ 0.29
PHF1O43189 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
PHF1O43189 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PHF1O43189 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PHF1O43189 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHF1O43189 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PHF1O43189 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PHF1O43189 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PHF1O43189 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.83■□□□□ 0.28
PHF1O43189 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.83■□□□□ 0.28
PHF1O43189 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.83■□□□□ 0.28
PHF1O43189 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PHF1O43189 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PHF1O43189 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF1O43189 AL020996.1-203ENST00000536896 2307 ntBASIC16.82■□□□□ 0.28
PHF1O43189 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms