Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.62■□□□□ 0.89
CAPN9O14815 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CAPN9O14815 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.62■□□□□ 0.89
CAPN9O14815 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN9O14815 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN9O14815 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.62■□□□□ 0.89
CAPN9O14815 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN9O14815 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN9O14815 AC009237.14-201ENST00000609975 1594 ntBASIC20.62■□□□□ 0.89
CAPN9O14815 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CAPN9O14815 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN9O14815 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN9O14815 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CAPN9O14815 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CAPN9O14815 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CAPN9O14815 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.62■□□□□ 0.89
CAPN9O14815 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CAPN9O14815 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.62■□□□□ 0.89
CAPN9O14815 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CAPN9O14815 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN9O14815 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN9O14815 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN9O14815 TMEM179-206ENST00000616017 1645 ntBASIC20.61■□□□□ 0.89
CAPN9O14815 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CAPN9O14815 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.61■□□□□ 0.89
CAPN9O14815 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CAPN9O14815 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN9O14815 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN9O14815 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN9O14815 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN9O14815 KRASP1-201ENST00000407852 552 ntBASIC20.61■□□□□ 0.89
CAPN9O14815 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN9O14815 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN9O14815 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN9O14815 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.61■□□□□ 0.89
CAPN9O14815 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN9O14815 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN9O14815 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN9O14815 FAM197Y4-202ENST00000622692 608 ntBASIC20.61■□□□□ 0.89
CAPN9O14815 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN9O14815 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CAPN9O14815 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN9O14815 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN9O14815 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.6■□□□□ 0.89
CAPN9O14815 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.6■□□□□ 0.89
CAPN9O14815 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.6■□□□□ 0.89
CAPN9O14815 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.6■□□□□ 0.89
CAPN9O14815 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.6■□□□□ 0.89
CAPN9O14815 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.6■□□□□ 0.89
CAPN9O14815 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
CAPN9O14815 AC142381.4-202ENST00000563973 229 ntBASIC20.6■□□□□ 0.89
CAPN9O14815 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.6■□□□□ 0.89
CAPN9O14815 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
CAPN9O14815 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 NBPF21P-201ENST00000425093 1451 ntBASIC20.6■□□□□ 0.89
CAPN9O14815 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN9O14815 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.6■□□□□ 0.89
CAPN9O14815 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CAPN9O14815 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN9O14815 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.59■□□□□ 0.89
CAPN9O14815 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN9O14815 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CAPN9O14815 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN9O14815 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.59■□□□□ 0.89
CAPN9O14815 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CAPN9O14815 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN9O14815 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN9O14815 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN9O14815 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN9O14815 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.59■□□□□ 0.89
CAPN9O14815 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CAPN9O14815 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.59■□□□□ 0.89
CAPN9O14815 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.59■□□□□ 0.89
CAPN9O14815 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.59■□□□□ 0.89
CAPN9O14815 RPPH1-201ENST00000516869 333 ntBASIC20.59■□□□□ 0.89
CAPN9O14815 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.59■□□□□ 0.89
CAPN9O14815 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CAPN9O14815 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.59■□□□□ 0.89
CAPN9O14815 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.59■□□□□ 0.89
CAPN9O14815 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.59■□□□□ 0.89
CAPN9O14815 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.59■□□□□ 0.89
CAPN9O14815 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN9O14815 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CAPN9O14815 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CAPN9O14815 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN9O14815 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CAPN9O14815 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN9O14815 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CAPN9O14815 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms