Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1AO00322 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1AO00322 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.54■□□□□ 0.56
UPK1AO00322 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.54■□□□□ 0.56
UPK1AO00322 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1AO00322 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.54■□□□□ 0.56
UPK1AO00322 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.54■□□□□ 0.56
UPK1AO00322 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
UPK1AO00322 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UPK1AO00322 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1AO00322 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1AO00322 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.54■□□□□ 0.56
UPK1AO00322 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.54■□□□□ 0.56
UPK1AO00322 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UPK1AO00322 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1AO00322 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
UPK1AO00322 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
UPK1AO00322 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
UPK1AO00322 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.53■□□□□ 0.56
UPK1AO00322 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.53■□□□□ 0.56
UPK1AO00322 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.53■□□□□ 0.56
UPK1AO00322 AL390719.1-204ENST00000412397 1219 ntBASIC18.53■□□□□ 0.56
UPK1AO00322 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
UPK1AO00322 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.53■□□□□ 0.56
UPK1AO00322 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.53■□□□□ 0.56
UPK1AO00322 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
UPK1AO00322 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
UPK1AO00322 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 AL138781.2-201ENST00000617896 1843 ntBASIC18.53■□□□□ 0.56
UPK1AO00322 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.53■□□□□ 0.56
UPK1AO00322 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
UPK1AO00322 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1AO00322 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1AO00322 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.52■□□□□ 0.56
UPK1AO00322 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
UPK1AO00322 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1AO00322 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1AO00322 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.52■□□□□ 0.56
UPK1AO00322 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
UPK1AO00322 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1AO00322 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1AO00322 AP001271.2-201ENST00000624018 1556 ntBASIC18.52■□□□□ 0.56
UPK1AO00322 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1AO00322 AC026471.1-201ENST00000564629 3026 ntBASIC18.52■□□□□ 0.56
UPK1AO00322 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1AO00322 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.52■□□□□ 0.56
UPK1AO00322 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1AO00322 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.52■□□□□ 0.56
UPK1AO00322 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.52■□□□□ 0.56
UPK1AO00322 HLA-B-256ENST00000639848 1089 ntBASIC18.52■□□□□ 0.56
UPK1AO00322 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPK1AO00322 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPK1AO00322 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPK1AO00322 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
UPK1AO00322 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.51■□□□□ 0.55
UPK1AO00322 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.51■□□□□ 0.55
UPK1AO00322 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.51■□□□□ 0.55
UPK1AO00322 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 ID1-201ENST00000376105 1233 ntBASIC18.51■□□□□ 0.55
UPK1AO00322 AL355802.2-201ENST00000402069 882 ntBASIC18.51■□□□□ 0.55
UPK1AO00322 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.51■□□□□ 0.55
UPK1AO00322 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.51■□□□□ 0.55
UPK1AO00322 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UPK1AO00322 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.51■□□□□ 0.55
UPK1AO00322 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.51■□□□□ 0.55
UPK1AO00322 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.51■□□□□ 0.55
UPK1AO00322 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.51■□□□□ 0.55
UPK1AO00322 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1AO00322 AC092368.3-202ENST00000574180 1591 ntBASIC18.51■□□□□ 0.55
UPK1AO00322 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms