Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.74■□□□□ 0.11
SRRM4A7MD48 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SRRM4A7MD48 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.74■□□□□ 0.11
SRRM4A7MD48 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.74■□□□□ 0.11
SRRM4A7MD48 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.74■□□□□ 0.11
SRRM4A7MD48 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.74■□□□□ 0.11
SRRM4A7MD48 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.74■□□□□ 0.11
SRRM4A7MD48 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.74■□□□□ 0.11
SRRM4A7MD48 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.74■□□□□ 0.11
SRRM4A7MD48 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.74■□□□□ 0.11
SRRM4A7MD48 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
SRRM4A7MD48 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRRM4A7MD48 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 BX323043.1-201ENST00000641006 1765 ntBASIC15.73■□□□□ 0.11
SRRM4A7MD48 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 AC090192.1-201ENST00000517740 490 ntBASIC15.73■□□□□ 0.11
SRRM4A7MD48 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 PNMA6B-201ENST00000538162 1200 ntBASIC15.73■□□□□ 0.11
SRRM4A7MD48 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SRRM4A7MD48 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRRM4A7MD48 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.72■□□□□ 0.11
SRRM4A7MD48 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SRRM4A7MD48 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.72■□□□□ 0.11
SRRM4A7MD48 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.72■□□□□ 0.11
SRRM4A7MD48 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.72■□□□□ 0.11
SRRM4A7MD48 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.72■□□□□ 0.11
SRRM4A7MD48 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.72■□□□□ 0.11
SRRM4A7MD48 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.72■□□□□ 0.11
SRRM4A7MD48 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.72■□□□□ 0.11
SRRM4A7MD48 AC060766.5-201ENST00000590539 871 ntBASIC15.72■□□□□ 0.11
SRRM4A7MD48 AC104771.1-201ENST00000603335 964 ntBASIC15.72■□□□□ 0.11
SRRM4A7MD48 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SRRM4A7MD48 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRRM4A7MD48 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRRM4A7MD48 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRRM4A7MD48 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRRM4A7MD48 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRRM4A7MD48 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRRM4A7MD48 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRRM4A7MD48 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRRM4A7MD48 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRRM4A7MD48 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 AC142086.2-201ENST00000569753 217 ntBASIC15.71■□□□□ 0.11
SRRM4A7MD48 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms