Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 AP003097.1-201ENST00000530657 1135 ntBASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 AP006587.1-201ENST00000534129 1502 ntBASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC162PA2VCL2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 AC026366.1-201ENST00000488803 879 ntBASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC162PA2VCL2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC162PA2VCL2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC162PA2VCL2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
CCDC162PA2VCL2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.52■□□□□ 0.71
CCDC162PA2VCL2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC162PA2VCL2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.71
CCDC162PA2VCL2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.52■□□□□ 0.71
CCDC162PA2VCL2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC162PA2VCL2 Z82202.1-201ENST00000623446 1880 ntBASIC19.52■□□□□ 0.71
CCDC162PA2VCL2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms