Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.07■□□□□ 0.16
A0A1W2PRF3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
A0A1W2PRF3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.07■□□□□ 0.16
A0A1W2PRF3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.07■□□□□ 0.16
A0A1W2PRF3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.06■□□□□ 0.16
A0A1W2PRF3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.06■□□□□ 0.16
A0A1W2PRF3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
A0A1W2PRF3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 AC116351.2-201ENST00000606540 1585 ntBASIC16.06■□□□□ 0.16
A0A1W2PRF3 AP006587.1-201ENST00000534129 1502 ntBASIC16.06■□□□□ 0.16
A0A1W2PRF3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
A0A1W2PRF3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.06■□□□□ 0.16
A0A1W2PRF3 MIR718-201ENST00000390190 70 ntBASIC16.06■□□□□ 0.16
A0A1W2PRF3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.06■□□□□ 0.16
A0A1W2PRF3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.06■□□□□ 0.16
A0A1W2PRF3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
A0A1W2PRF3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.06■□□□□ 0.16
A0A1W2PRF3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
A0A1W2PRF3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A1W2PRF3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A1W2PRF3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A1W2PRF3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A1W2PRF3 HTR7P1-201ENST00000538670 1336 ntBASIC16.05■□□□□ 0.16
A0A1W2PRF3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
A0A1W2PRF3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 SNORA78-201ENST00000459373 127 ntBASIC16.05■□□□□ 0.16
A0A1W2PRF3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 AC004264.1-201ENST00000608354 794 ntBASIC16.05■□□□□ 0.16
A0A1W2PRF3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A1W2PRF3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A1W2PRF3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A1W2PRF3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
A0A1W2PRF3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 AL162377.1-201ENST00000618844 1793 ntBASIC16.05■□□□□ 0.16
A0A1W2PRF3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
A0A1W2PRF3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.05■□□□□ 0.16
A0A1W2PRF3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
A0A1W2PRF3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.04■□□□□ 0.16
A0A1W2PRF3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
A0A1W2PRF3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
A0A1W2PRF3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
A0A1W2PRF3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.04■□□□□ 0.16
A0A1W2PRF3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
A0A1W2PRF3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
A0A1W2PRF3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
A0A1W2PRF3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
A0A1W2PRF3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
A0A1W2PRF3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.03■□□□□ 0.16
A0A1W2PRF3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
A0A1W2PRF3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
A0A1W2PRF3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
A0A1W2PRF3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
A0A1W2PRF3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
A0A1W2PRF3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
A0A1W2PRF3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.03■□□□□ 0.16
A0A1W2PRF3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
A0A1W2PRF3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
A0A1W2PRF3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
A0A1W2PRF3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms