Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 CKBP1-201ENST00000565489 1086 ntBASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 NEK4P2-201ENST00000580004 1012 ntBASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 CLEC4GP1-201ENST00000596555 870 ntBASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC163A0A0D9SF12 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC163A0A0D9SF12 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
CCDC163A0A0D9SF12 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 VENTXP5-201ENST00000523979 775 ntBASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 AP003041.3-201ENST00000527151 707 ntBASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC163A0A0D9SF12 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 AC092720.2-201ENST00000602388 1665 ntBASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC163A0A0D9SF12 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 STARP1-201ENST00000397973 869 ntBASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 KRT18P38-201ENST00000449496 1282 ntBASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC163A0A0D9SF12 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms