Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 TUBB8P6-201ENST00000436895 1288 ntBASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGHV4-28A0A0C4DH34 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 AL691432.2-201ENST00000607222 2038 ntBASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 KRT18P16-201ENST00000510337 1294 ntBASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 AC073195.1-201ENST00000607241 877 ntBASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-28A0A0C4DH34 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 AC099778.1-201ENST00000568593 1911 ntBASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 FAM197Y1-201ENST00000421178 764 ntBASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 C1QL1P1-201ENST00000568105 661 ntBASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms