Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV4A0A0C4DH28 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 AC133041.1-202ENST00000642053 222 ntBASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 AC092368.3-202ENST00000574180 1591 ntBASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV4A0A0C4DH28 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 CROCCP1-201ENST00000426910 5675 ntBASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 GUSBP6-202ENST00000438529 1198 ntBASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 AC005829.2-201ENST00000571422 1056 ntBASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 AC009237.14-201ENST00000609975 1594 ntBASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV4A0A0C4DH28 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.02□□□□□ -0.16
TRGV4A0A0C4DH28 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms