Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 PHGDH-210ENST00000641115 1638 ntBASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 AL138781.2-201ENST00000617896 1843 ntBASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 MCRIP2P1-201ENST00000394346 511 ntBASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV5A0A0B4J249 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 HLA-G-202ENST00000376815 851 ntBASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 HLA-G-203ENST00000376818 1127 ntBASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV5A0A0B4J249 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 CROCCP3-202ENST00000420820 1947 ntBASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 AL049812.1-201ENST00000432563 2267 ntBASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV5A0A0B4J249 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms