Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 KRT19P1-201ENST00000405746 1186 ntBASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC005837.3-201ENST00000612163 286 ntBASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 KRT18P61-201ENST00000585825 1298 ntBASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC016405.3-201ENST00000607710 860 ntBASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AL138781.2-201ENST00000617896 1843 ntBASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV8-1A0A0A6YYK1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV8-1A0A0A6YYK1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV8-1A0A0A6YYK1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAV8-1A0A0A6YYK1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms