Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AP003175.1-201ENST00000641383 6658 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 RNF6P1-201ENST00000444889 1784 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 RBMX2P2-201ENST00000257020 946 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 SNORA3.1-201ENST00000408166 111 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 RPL36P18-201ENST00000419316 318 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 TEX41-204ENST00000423031 491 ntTSL 4 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 RPS27AP6-201ENST00000427962 448 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC000362.1-201ENST00000433725 425 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 YWHAQP9-201ENST00000445891 512 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 CDC42P2-201ENST00000448566 569 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 MGAT2P1-201ENST00000449718 797 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 OR52E7P-201ENST00000452394 933 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 PYM1-204ENST00000454792 884 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 IGLVI-42-201ENST00000522485 381 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 HIGD1AP9-201ENST00000550710 279 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 OR5AH1P-201ENST00000595968 283 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC090948.2-201ENST00000607363 564 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 SAMMSON-227ENST00000642114 1199 ntBASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 CUBNP3-201ENST00000457461 1784 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC107021.2-201ENST00000567714 2095 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF658B-201ENST00000602828 3408 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 UG0898H09-202ENST00000623646 7040 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC025125.1-201ENST00000624743 1922 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 OR11H4-201ENST00000315409 1082 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 PTMAP8-201ENST00000397729 342 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 NPM1P38-201ENST00000403835 865 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 RN7SKP222-201ENST00000410651 315 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 JKAMPP1-201ENST00000413804 919 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC231533.2-201ENST00000419045 978 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 HMGB3P10-201ENST00000434734 572 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 LSM1P1-201ENST00000438629 273 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 RPL23AP16-201ENST00000441715 421 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms