Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 BTF3L4-201ENST00000313334 4703 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 PUS7-201ENST00000356362 3480 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 NLRP12-205ENST00000391775 3465 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 PLA2G4D-201ENST00000290472 3584 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 ZNF700-203ENST00000622593 2901 ntAPPRIS ALT2 TSL 4 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 ABLIM1-203ENST00000369253 2255 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AL133383.2-201ENST00000622958 2336 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 RALBP1-201ENST00000019317 4368 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AC110053.1-201ENST00000523156 1744 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 KBTBD12-203ENST00000405256 5268 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AC110597.1-201ENST00000562669 3176 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 HAVCR1-201ENST00000339252 1845 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 MFSD8-227ENST00000641393 4069 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 IGSF3-203ENST00000369486 7254 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 NDST2-201ENST00000299641 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 RTCB-201ENST00000216038 2027 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 DHX29-205ENST00000621106 4450 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 ADAMTSL1-201ENST00000276935 2906 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 RNU6-799P-201ENST00000363567 107 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 Y_RNA.190-201ENST00000363964 101 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 RN7SKP10-201ENST00000364291 325 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 UQCRQ-202ENST00000378667 429 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 U3.49-201ENST00000391065 214 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 GAGE10-201ENST00000407599 538 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 MIR1265-201ENST00000408444 86 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AL139281.1-201ENST00000422120 335 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 MTHFD2P3-201ENST00000423135 221 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 ACTG1P21-201ENST00000431536 1000 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 LINC01076-201ENST00000435725 302 ntTSL 3 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 POLR2LP1-206ENST00000444785 187 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 CR769776.2-201ENST00000445057 378 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 RNU6-1218P-201ENST00000458990 108 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 RNA5SP522-201ENST00000516144 116 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 RNA5SP521-201ENST00000516203 116 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 RNA5SP520-201ENST00000516506 113 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 RNA5SP523-201ENST00000516858 113 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AC008438.2-201ENST00000520443 570 ntTSL 4 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AP000435.1-201ENST00000528539 496 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AP001781.1-201ENST00000530977 207 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 CCND2P1-201ENST00000539268 799 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 ACSL6-221ENST00000543479 2139 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 PINLYP-203ENST00000562255 569 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AC104758.4-201ENST00000565869 353 ntTSL 3 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 APOC1P1-204ENST00000575148 560 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AC006441.4-201ENST00000583161 636 ntTSL 3 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 UBBP4-201ENST00000583708 689 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AC012531.4-201ENST00000616509 177 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 CU633906.3-201ENST00000623377 741 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AP001525.1-201ENST00000624611 236 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 LINC01651-201ENST00000624642 350 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 DEF8-229ENST00000617948 3883 ntAPPRIS P4 TSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 FCAMR-204ENST00000450945 1307 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 VPS11-208ENST00000621676 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 ZFAND5-201ENST00000237937 5310 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 PLEKHS1-201ENST00000354462 3403 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 AL137127.1-201ENST00000606379 3402 ntBASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 RNF138-202ENST00000261593 3570 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 SMARCAD1-204ENST00000457823 4649 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 PSAPL1-201ENST00000319098 4680 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 RAPGEF3-204ENST00000405493 5751 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 DDX27-207ENST00000622530 2693 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 HAP1-202ENST00000341193 3880 ntTSL 2 BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 ATP8B5P-201ENST00000329395 2869 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP3-3Q9BYR6 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms