Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NPAS3Q8IXF0 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NPAS3Q8IXF0 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NPAS3Q8IXF0 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.38□□□□□ -1.23
NPAS3Q8IXF0 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC010928.1-201ENST00000592477 1447 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 RNA5SP382-201ENST00000363355 112 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 Y_RNA.257-201ENST00000364596 102 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 RAB5CP1-201ENST00000395972 580 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 RN7SKP32-201ENST00000410167 303 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 RPS3AP3-201ENST00000411933 242 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 BX295541.1-201ENST00000417774 250 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 MTCO2P5-201ENST00000422621 426 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC007365.2-201ENST00000428806 458 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 LINC00328-2P-201ENST00000436585 219 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AL031681.1-201ENST00000443304 400 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 PSPC1P2-201ENST00000455130 225 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 RN7SL393P-201ENST00000463588 296 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 RN7SL83P-201ENST00000468131 297 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AL135752.1-201ENST00000479477 471 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AP003122.4-201ENST00000530980 758 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AL137100.2-201ENST00000555786 315 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 MIR378C-201ENST00000578683 81 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 MIR3157-201ENST00000578688 85 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 MIR4307-201ENST00000582802 84 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 RPL12P25-202ENST00000598100 674 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AL713866.2-201ENST00000603579 219 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC080078.3-201ENST00000605407 463 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC037198.3-201ENST00000616754 526 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 MRPL57P3-201ENST00000619218 176 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC100810.6-201ENST00000638068 285 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC011471.4-201ENST00000638271 216 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AC023632.6-201ENST00000624338 2177 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 MTCO1P12-201ENST00000414273 1543 ntBASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS3Q8IXF0 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 MKI67P1-201ENST00000604297 1460 ntBASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS3Q8IXF0 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms