Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
NEK3P51956 RNU6-932P-201ENST00000391108 106 ntBASIC5.97□□□□□ -1.45
NEK3P51956 DNAJC19P6-201ENST00000401853 280 ntBASIC5.97□□□□□ -1.45
NEK3P51956 RPS3AP2-201ENST00000407190 754 ntBASIC5.97□□□□□ -1.45
NEK3P51956 AC245060.4-201ENST00000413293 1121 ntBASIC5.97□□□□□ -1.45
NEK3P51956 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.97□□□□□ -1.45
NEK3P51956 NAP1L4P2-201ENST00000425958 899 ntBASIC5.97□□□□□ -1.45
NEK3P51956 AC099677.3-201ENST00000427081 395 ntBASIC5.97□□□□□ -1.45
NEK3P51956 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.97□□□□□ -1.45
NEK3P51956 AC104843.2-201ENST00000427666 297 ntBASIC5.97□□□□□ -1.45
NEK3P51956 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.97□□□□□ -1.45
NEK3P51956 AC099670.2-201ENST00000435130 321 ntBASIC5.97□□□□□ -1.45
NEK3P51956 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.97□□□□□ -1.45
NEK3P51956 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.97□□□□□ -1.45
NEK3P51956 HSFY3P-201ENST00000444242 1191 ntBASIC5.97□□□□□ -1.45
NEK3P51956 RPL31P15-201ENST00000449770 338 ntBASIC5.97□□□□□ -1.45
NEK3P51956 SETP20-201ENST00000457046 852 ntBASIC5.97□□□□□ -1.45
NEK3P51956 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.97□□□□□ -1.45
NEK3P51956 AC104109.1-201ENST00000498563 436 ntBASIC5.97□□□□□ -1.45
NEK3P51956 AC010374.1-201ENST00000503762 1237 ntBASIC5.97□□□□□ -1.45
NEK3P51956 AC111000.6-201ENST00000514471 709 ntBASIC5.97□□□□□ -1.45
NEK3P51956 HMGB1P1-201ENST00000522557 636 ntBASIC5.97□□□□□ -1.45
NEK3P51956 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.97□□□□□ -1.45
NEK3P51956 AC090424.1-201ENST00000535243 736 ntBASIC5.97□□□□□ -1.45
NEK3P51956 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.97□□□□□ -1.45
NEK3P51956 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.97□□□□□ -1.45
NEK3P51956 AC068714.1-201ENST00000559623 800 ntBASIC5.97□□□□□ -1.45
NEK3P51956 AC095057.3-201ENST00000567102 1157 ntBASIC5.97□□□□□ -1.45
NEK3P51956 AP000919.1-202ENST00000581139 1264 ntBASIC5.97□□□□□ -1.45
NEK3P51956 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NEK3P51956 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.97□□□□□ -1.45
NEK3P51956 AC112503.1-201ENST00000608436 391 ntBASIC5.97□□□□□ -1.45
NEK3P51956 AC055764.2-201ENST00000610089 670 ntBASIC5.97□□□□□ -1.45
NEK3P51956 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.97□□□□□ -1.45
NEK3P51956 AC138907.10-201ENST00000623708 983 ntBASIC5.97□□□□□ -1.45
NEK3P51956 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.97□□□□□ -1.45
NEK3P51956 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.97□□□□□ -1.45
NEK3P51956 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
NEK3P51956 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
NEK3P51956 AC005332.5-201ENST00000591222 2919 ntBASIC5.97□□□□□ -1.45
NEK3P51956 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
NEK3P51956 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.97□□□□□ -1.45
NEK3P51956 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
NEK3P51956 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
NEK3P51956 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.96□□□□□ -1.45
NEK3P51956 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
NEK3P51956 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
NEK3P51956 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
NEK3P51956 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NEK3P51956 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NEK3P51956 AC009313.2-201ENST00000417893 1941 ntBASIC5.96□□□□□ -1.46
NEK3P51956 RN7SKP78-201ENST00000364711 318 ntBASIC5.96□□□□□ -1.46
NEK3P51956 RNA5SP211-201ENST00000365516 117 ntBASIC5.96□□□□□ -1.46
NEK3P51956 RNU6-98P-201ENST00000384173 107 ntBASIC5.96□□□□□ -1.46
NEK3P51956 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.96□□□□□ -1.46
NEK3P51956 AC126120.1-201ENST00000431082 470 ntBASIC5.96□□□□□ -1.46
NEK3P51956 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NEK3P51956 ARL5AP2-201ENST00000444698 533 ntBASIC5.96□□□□□ -1.46
NEK3P51956 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.96□□□□□ -1.46
NEK3P51956 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.96□□□□□ -1.46
NEK3P51956 AC243772.1-201ENST00000451620 410 ntBASIC5.96□□□□□ -1.46
NEK3P51956 AL445665.1-202ENST00000452436 324 ntBASIC5.96□□□□□ -1.46
NEK3P51956 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.96□□□□□ -1.46
NEK3P51956 NXT1P1-201ENST00000458481 316 ntBASIC5.96□□□□□ -1.46
NEK3P51956 RNU6-1218P-201ENST00000458990 108 ntBASIC5.96□□□□□ -1.46
NEK3P51956 PPIAP19-201ENST00000486414 492 ntBASIC5.96□□□□□ -1.46
NEK3P51956 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.96□□□□□ -1.46
NEK3P51956 AC026782.2-201ENST00000510845 636 ntBASIC5.96□□□□□ -1.46
NEK3P51956 MTATP6P1-201ENST00000514057 681 ntBASIC5.96□□□□□ -1.46
NEK3P51956 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.96□□□□□ -1.46
NEK3P51956 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.96□□□□□ -1.46
NEK3P51956 AC006530.1-201ENST00000555980 571 ntBASIC5.96□□□□□ -1.46
NEK3P51956 AC007346.2-201ENST00000564816 892 ntBASIC5.96□□□□□ -1.46
NEK3P51956 AC023825.1-201ENST00000566704 1030 ntBASIC5.96□□□□□ -1.46
NEK3P51956 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
NEK3P51956 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NEK3P51956 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NEK3P51956 BNIP3P40-201ENST00000596017 556 ntBASIC5.96□□□□□ -1.46
NEK3P51956 AC016597.2-201ENST00000613256 341 ntBASIC5.96□□□□□ -1.46
NEK3P51956 AL139099.4-201ENST00000614802 114 ntBASIC5.96□□□□□ -1.46
NEK3P51956 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NEK3P51956 AL121890.3-201ENST00000618494 516 ntBASIC5.96□□□□□ -1.46
NEK3P51956 AL512427.1-201ENST00000618593 349 ntBASIC5.96□□□□□ -1.46
NEK3P51956 AC127024.6-201ENST00000621598 424 ntBASIC5.96□□□□□ -1.46
NEK3P51956 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.96□□□□□ -1.46
NEK3P51956 AC103703.1-201ENST00000634783 663 ntBASIC5.96□□□□□ -1.46
NEK3P51956 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NEK3P51956 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NEK3P51956 AC106872.5-201ENST00000508856 1416 ntBASIC5.96□□□□□ -1.46
NEK3P51956 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
NEK3P51956 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
NEK3P51956 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
NEK3P51956 AL627171.1-201ENST00000618845 1308 ntBASIC5.96□□□□□ -1.46
NEK3P51956 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NEK3P51956 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NEK3P51956 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 LINC02019-201ENST00000608605 2060 ntBASIC5.95□□□□□ -1.46
NEK3P51956 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEK3P51956 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms