Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CASP4P49662 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CASP4P49662 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CASP4P49662 AL138820.1-201ENST00000617901 5305 ntBASIC5.46□□□□□ -1.54
CASP4P49662 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CASP4P49662 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CASP4P49662 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CASP4P49662 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CASP4P49662 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.46□□□□□ -1.54
CASP4P49662 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CASP4P49662 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CASP4P49662 THAP12P4-201ENST00000528321 2266 ntBASIC5.45□□□□□ -1.54
CASP4P49662 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CASP4P49662 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.45□□□□□ -1.54
CASP4P49662 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CASP4P49662 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CASP4P49662 SNORA66-201ENST00000384792 133 ntBASIC5.45□□□□□ -1.54
CASP4P49662 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CASP4P49662 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.45□□□□□ -1.54
CASP4P49662 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.45□□□□□ -1.54
CASP4P49662 RNU4-34P-201ENST00000410431 124 ntBASIC5.45□□□□□ -1.54
CASP4P49662 GJA6P-201ENST00000415117 1042 ntBASIC5.45□□□□□ -1.54
CASP4P49662 HMGN2P27-201ENST00000427352 270 ntBASIC5.45□□□□□ -1.54
CASP4P49662 BX119904.3-201ENST00000428194 957 ntBASIC5.45□□□□□ -1.54
CASP4P49662 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.45□□□□□ -1.54
CASP4P49662 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.45□□□□□ -1.54
CASP4P49662 SCAND3P1-201ENST00000439854 1060 ntBASIC5.45□□□□□ -1.54
CASP4P49662 AC073052.1-201ENST00000440417 714 ntBASIC5.45□□□□□ -1.54
CASP4P49662 AL157385.1-201ENST00000446973 268 ntBASIC5.45□□□□□ -1.54
CASP4P49662 MRPL35P2-201ENST00000448009 511 ntBASIC5.45□□□□□ -1.54
CASP4P49662 NDUFA5P8-201ENST00000449019 346 ntBASIC5.45□□□□□ -1.54
CASP4P49662 NPM1P19-201ENST00000450070 712 ntBASIC5.45□□□□□ -1.54
CASP4P49662 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.45□□□□□ -1.54
CASP4P49662 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.45□□□□□ -1.54
CASP4P49662 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CASP4P49662 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.45□□□□□ -1.54
CASP4P49662 COX6B1P5-201ENST00000509843 249 ntBASIC5.45□□□□□ -1.54
CASP4P49662 RN7SKP66-201ENST00000516681 231 ntBASIC5.45□□□□□ -1.54
CASP4P49662 RN7SKP5-201ENST00000517045 272 ntBASIC5.45□□□□□ -1.54
CASP4P49662 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.45□□□□□ -1.54
CASP4P49662 AC105031.1-201ENST00000518550 476 ntBASIC5.45□□□□□ -1.54
CASP4P49662 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.45□□□□□ -1.54
CASP4P49662 AGGF1P9-201ENST00000561884 913 ntBASIC5.45□□□□□ -1.54
CASP4P49662 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.45□□□□□ -1.54
CASP4P49662 AL121612.2-201ENST00000612261 482 ntBASIC5.45□□□□□ -1.54
CASP4P49662 SAMMSON-227ENST00000642114 1199 ntBASIC5.45□□□□□ -1.54
CASP4P49662 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
CASP4P49662 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.45□□□□□ -1.54
CASP4P49662 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CASP4P49662 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CASP4P49662 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CASP4P49662 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.45□□□□□ -1.54
CASP4P49662 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.45□□□□□ -1.54
CASP4P49662 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CASP4P49662 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CASP4P49662 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.45□□□□□ -1.54
CASP4P49662 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CASP4P49662 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.44□□□□□ -1.54
CASP4P49662 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.44□□□□□ -1.54
CASP4P49662 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CASP4P49662 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.44□□□□□ -1.54
CASP4P49662 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CASP4P49662 RNU4-4P-201ENST00000364588 130 ntBASIC5.44□□□□□ -1.54
CASP4P49662 RNA5SP428-201ENST00000365129 132 ntBASIC5.44□□□□□ -1.54
CASP4P49662 AC005522.1-201ENST00000395416 346 ntBASIC5.44□□□□□ -1.54
CASP4P49662 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.44□□□□□ -1.54
CASP4P49662 SPTLC1P2-201ENST00000407089 121 ntBASIC5.44□□□□□ -1.54
CASP4P49662 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.44□□□□□ -1.54
CASP4P49662 RPL35AP21-201ENST00000437667 333 ntBASIC5.44□□□□□ -1.54
CASP4P49662 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.44□□□□□ -1.54
CASP4P49662 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.44□□□□□ -1.54
CASP4P49662 BTF3P6-201ENST00000448054 499 ntBASIC5.44□□□□□ -1.54
CASP4P49662 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CASP4P49662 OR5M14P-201ENST00000506803 618 ntBASIC5.44□□□□□ -1.54
CASP4P49662 MRPS33P2-201ENST00000507850 322 ntBASIC5.44□□□□□ -1.54
CASP4P49662 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.44□□□□□ -1.54
CASP4P49662 RN7SKP260-201ENST00000516907 149 ntBASIC5.44□□□□□ -1.54
CASP4P49662 RN7SKP147-201ENST00000517154 244 ntBASIC5.44□□□□□ -1.54
CASP4P49662 AC005868.1-201ENST00000536421 331 ntBASIC5.44□□□□□ -1.54
CASP4P49662 AC011840.5-201ENST00000582125 771 ntBASIC5.44□□□□□ -1.54
CASP4P49662 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.44□□□□□ -1.54
CASP4P49662 EIF1P5-201ENST00000585002 234 ntBASIC5.44□□□□□ -1.54
CASP4P49662 MEMO1P5-201ENST00000604810 406 ntBASIC5.44□□□□□ -1.54
CASP4P49662 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.44□□□□□ -1.54
CASP4P49662 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.44□□□□□ -1.54
CASP4P49662 AC018445.2-201ENST00000622987 260 ntBASIC5.44□□□□□ -1.54
CASP4P49662 AC087821.1-201ENST00000623639 567 ntBASIC5.44□□□□□ -1.54
CASP4P49662 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.44□□□□□ -1.54
CASP4P49662 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.44□□□□□ -1.54
CASP4P49662 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.44□□□□□ -1.54
CASP4P49662 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CASP4P49662 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CASP4P49662 AC104623.2-202ENST00000623477 4002 ntBASIC5.44□□□□□ -1.54
CASP4P49662 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CASP4P49662 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CASP4P49662 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CASP4P49662 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CASP4P49662 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CASP4P49662 MRRFP1-201ENST00000435941 1675 ntBASIC5.43□□□□□ -1.54
CASP4P49662 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms