Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.69□□□□□ -1.18
RXRBP28702 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.69□□□□□ -1.18
RXRBP28702 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC7.69□□□□□ -1.18
RXRBP28702 AC021733.2-201ENST00000518830 497 ntBASIC7.69□□□□□ -1.18
RXRBP28702 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7.69□□□□□ -1.18
RXRBP28702 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 AC007115.1-201ENST00000546853 234 ntBASIC7.69□□□□□ -1.18
RXRBP28702 PARP1P2-201ENST00000556806 195 ntBASIC7.69□□□□□ -1.18
RXRBP28702 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC7.69□□□□□ -1.18
RXRBP28702 AP001981.2-201ENST00000603241 418 ntBASIC7.69□□□□□ -1.18
RXRBP28702 AC002069.2-201ENST00000603580 883 ntBASIC7.69□□□□□ -1.18
RXRBP28702 AC104687.2-201ENST00000604442 342 ntBASIC7.69□□□□□ -1.18
RXRBP28702 AP003973.1-201ENST00000604639 691 ntBASIC7.69□□□□□ -1.18
RXRBP28702 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 MIR1264-201ENST00000616374 69 ntBASIC7.69□□□□□ -1.18
RXRBP28702 AL158163.2-201ENST00000619110 700 ntBASIC7.69□□□□□ -1.18
RXRBP28702 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC7.69□□□□□ -1.18
RXRBP28702 AC022140.2-201ENST00000623500 188 ntBASIC7.69□□□□□ -1.18
RXRBP28702 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.69□□□□□ -1.18
RXRBP28702 AL160394.1-201ENST00000624765 724 ntBASIC7.69□□□□□ -1.18
RXRBP28702 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.69□□□□□ -1.18
RXRBP28702 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
RXRBP28702 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.69□□□□□ -1.18
RXRBP28702 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
RXRBP28702 CASC19-221ENST00000641309 1382 ntBASIC7.69□□□□□ -1.18
RXRBP28702 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
RXRBP28702 AL390237.1-201ENST00000404226 1415 ntBASIC7.69□□□□□ -1.18
RXRBP28702 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.69□□□□□ -1.18
RXRBP28702 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.69□□□□□ -1.18
RXRBP28702 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.68□□□□□ -1.18
RXRBP28702 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RXRBP28702 TCP1P3-201ENST00000414406 1498 ntBASIC7.68□□□□□ -1.18
RXRBP28702 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RXRBP28702 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.68□□□□□ -1.18
RXRBP28702 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
RXRBP28702 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.68□□□□□ -1.18
RXRBP28702 AC073544.1-201ENST00000600110 1595 ntBASIC7.68□□□□□ -1.18
RXRBP28702 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.68□□□□□ -1.18
RXRBP28702 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RXRBP28702 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RXRBP28702 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RXRBP28702 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RXRBP28702 AL159987.1-201ENST00000347911 293 ntBASIC7.68□□□□□ -1.18
RXRBP28702 Y_RNA.77-201ENST00000362962 107 ntBASIC7.68□□□□□ -1.18
RXRBP28702 RNU1-43P-201ENST00000365052 165 ntBASIC7.68□□□□□ -1.18
RXRBP28702 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
RXRBP28702 RAP1BP1-201ENST00000412709 553 ntBASIC7.68□□□□□ -1.18
RXRBP28702 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.68□□□□□ -1.18
RXRBP28702 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.68□□□□□ -1.18
RXRBP28702 AP002371.1-201ENST00000463604 433 ntBASIC7.68□□□□□ -1.18
RXRBP28702 RPS17P11-201ENST00000474297 293 ntBASIC7.68□□□□□ -1.18
RXRBP28702 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC7.68□□□□□ -1.18
RXRBP28702 AC010374.1-201ENST00000503762 1237 ntBASIC7.68□□□□□ -1.18
RXRBP28702 RPF2P2-201ENST00000504693 896 ntBASIC7.68□□□□□ -1.18
RXRBP28702 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC7.68□□□□□ -1.18
RXRBP28702 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.68□□□□□ -1.18
RXRBP28702 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
RXRBP28702 XKRY-201ENST00000510392 1100 ntBASIC7.68□□□□□ -1.18
RXRBP28702 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC7.68□□□□□ -1.18
RXRBP28702 RNU6-889P-201ENST00000517189 103 ntBASIC7.68□□□□□ -1.18
RXRBP28702 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC7.68□□□□□ -1.18
RXRBP28702 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC7.68□□□□□ -1.18
RXRBP28702 AC136624.4-201ENST00000573044 370 ntBASIC7.68□□□□□ -1.18
RXRBP28702 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.68□□□□□ -1.18
RXRBP28702 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.68□□□□□ -1.18
RXRBP28702 AC091135.1-201ENST00000585943 307 ntBASIC7.68□□□□□ -1.18
RXRBP28702 FAM60CP-201ENST00000591086 664 ntBASIC7.68□□□□□ -1.18
RXRBP28702 AC078795.2-201ENST00000602835 1252 ntBASIC7.68□□□□□ -1.18
RXRBP28702 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.68□□□□□ -1.18
RXRBP28702 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RXRBP28702 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.68□□□□□ -1.18
RXRBP28702 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.68□□□□□ -1.18
RXRBP28702 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.68□□□□□ -1.18
RXRBP28702 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
RXRBP28702 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RXRBP28702 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
RXRBP28702 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RXRBP28702 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.68□□□□□ -1.18
RXRBP28702 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.68□□□□□ -1.18
RXRBP28702 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
RXRBP28702 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RXRBP28702 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RXRBP28702 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RXRBP28702 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RXRBP28702 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
RXRBP28702 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RXRBP28702 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.67□□□□□ -1.18
RXRBP28702 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RXRBP28702 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RXRBP28702 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RXRBP28702 RPL32P3-201ENST00000359025 275 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.67□□□□□ -1.18
RXRBP28702 RN7SKP113-201ENST00000363891 295 ntBASIC7.67□□□□□ -1.18
RXRBP28702 RNU6-207P-201ENST00000384137 107 ntBASIC7.67□□□□□ -1.18
RXRBP28702 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.67□□□□□ -1.18
RXRBP28702 SNX10-203ENST00000409367 746 ntTSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms