Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AL442128.2-201ENST00000620246 1824 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 OR5BC1P-201ENST00000529327 739 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 ZNF969P-201ENST00000510345 2341 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 RNA5SP80-201ENST00000410475 111 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 OR2AS1P-201ENST00000427827 319 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC116667.1-201ENST00000604855 2072 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC003973.3-201ENST00000624863 2822 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AL590240.2-201ENST00000413370 894 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 MIR5685-201ENST00000579080 79 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AL049844.2-201ENST00000604280 628 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC099669.2-201ENST00000616549 437 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AL034408.1-202ENST00000636088 415 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 U3.26-201ENST00000391236 204 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 RN7SL356P-201ENST00000582228 248 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 HLA-N-201ENST00000437516 135 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 RPS4XP12-201ENST00000461747 709 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC023818.1-201ENST00000498379 384 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC069061.3-201ENST00000582254 823 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms