Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 AGGF1P7-201ENST00000562369 913 ntBASIC5.33□□□□□ -1.56
TRIM4Q9C037 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.33□□□□□ -1.56
TRIM4Q9C037 AL390318.1-201ENST00000624564 687 ntBASIC5.33□□□□□ -1.56
TRIM4Q9C037 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM4Q9C037 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM4Q9C037 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM4Q9C037 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM4Q9C037 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM4Q9C037 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM4Q9C037 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM4Q9C037 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM4Q9C037 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM4Q9C037 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM4Q9C037 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM4Q9C037 AL121886.1-201ENST00000358609 435 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 RNA5SP319-201ENST00000362768 119 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 RNA5SP234-201ENST00000363916 119 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 SLC35E1P1-201ENST00000419313 864 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM4Q9C037 AL450263.2-201ENST00000439400 589 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 AC245047.2-201ENST00000441060 530 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 PRPF38AP1-201ENST00000451976 933 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 RPS23P2-201ENST00000463671 415 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 AL591473.1-201ENST00000464297 313 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 AC083982.1-201ENST00000485679 344 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 AP000676.2-201ENST00000529711 301 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 AL049779.2-201ENST00000553847 315 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 AC040958.1-201ENST00000561102 201 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 RPL10P14-201ENST00000565265 298 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 RBM22P12-201ENST00000567098 1255 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 MIR4480-201ENST00000582492 71 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 AC233280.2-201ENST00000603917 1070 ntBASIC5.32□□□□□ -1.56
TRIM4Q9C037 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM4Q9C037 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM4Q9C037 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM4Q9C037 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM4Q9C037 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM4Q9C037 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRIM4Q9C037 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM4Q9C037 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM4Q9C037 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM4Q9C037 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM4Q9C037 CYB5AP4-201ENST00000396692 399 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 COX5BP7-201ENST00000414780 274 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 RNF10P1-201ENST00000418589 369 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 RPS26P13-201ENST00000419030 330 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 CYCSP12-201ENST00000437729 300 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 AL596266.1-201ENST00000448132 400 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 AC092905.1-201ENST00000467527 949 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 RN7SL51P-201ENST00000468230 285 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 RPS29P22-201ENST00000472363 168 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 RN7SL583P-201ENST00000475692 287 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM4Q9C037 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM4Q9C037 SCARNA6.1-201ENST00000516989 238 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms