Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
ABCA3Q99758 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ABCA3Q99758 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ABCA3Q99758 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.48□□□□□ -1.37
ABCA3Q99758 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ABCA3Q99758 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ABCA3Q99758 RAD17P1-201ENST00000418130 2042 ntBASIC6.48□□□□□ -1.37
ABCA3Q99758 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
ABCA3Q99758 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
ABCA3Q99758 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ABCA3Q99758 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ABCA3Q99758 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
ABCA3Q99758 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
ABCA3Q99758 AL451142.1-201ENST00000375867 775 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 RPL32P23-201ENST00000397237 405 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.47□□□□□ -1.37
ABCA3Q99758 RPL7AP49-201ENST00000429522 581 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 AL591438.1-201ENST00000433508 581 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 AC099670.2-201ENST00000435130 321 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 AC073052.1-201ENST00000440417 714 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 CR383656.1-201ENST00000484916 377 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.47□□□□□ -1.37
ABCA3Q99758 RPSAP51-201ENST00000497462 645 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.47□□□□□ -1.37
ABCA3Q99758 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.47□□□□□ -1.37
ABCA3Q99758 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.47□□□□□ -1.37
ABCA3Q99758 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.47□□□□□ -1.37
ABCA3Q99758 AC007497.1-201ENST00000610421 561 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.47□□□□□ -1.37
ABCA3Q99758 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
ABCA3Q99758 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.47□□□□□ -1.37
ABCA3Q99758 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.47□□□□□ -1.37
ABCA3Q99758 SALL4P2-201ENST00000423288 2910 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 ZFRP1-201ENST00000457579 2970 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.47□□□□□ -1.37
ABCA3Q99758 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.47□□□□□ -1.37
ABCA3Q99758 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.47□□□□□ -1.37
ABCA3Q99758 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.47□□□□□ -1.37
ABCA3Q99758 AC091868.1-201ENST00000508746 304 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.47□□□□□ -1.37
ABCA3Q99758 MIR4429-201ENST00000580105 73 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 MIR7853-201ENST00000584820 132 ntBASIC6.47□□□□□ -1.37
ABCA3Q99758 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.47□□□□□ -1.37
ABCA3Q99758 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.47□□□□□ -1.37
ABCA3Q99758 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ABCA3Q99758 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.46□□□□□ -1.37
ABCA3Q99758 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
ABCA3Q99758 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
ABCA3Q99758 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ABCA3Q99758 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ABCA3Q99758 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ABCA3Q99758 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.46□□□□□ -1.38
ABCA3Q99758 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ABCA3Q99758 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
ABCA3Q99758 RNU1-85P-201ENST00000364127 164 ntBASIC6.46□□□□□ -1.38
ABCA3Q99758 GPS2P1-201ENST00000411761 986 ntBASIC6.46□□□□□ -1.38
ABCA3Q99758 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.46□□□□□ -1.38
ABCA3Q99758 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ABCA3Q99758 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.46□□□□□ -1.38
ABCA3Q99758 AC114755.5-201ENST00000447760 831 ntBASIC6.46□□□□□ -1.38
ABCA3Q99758 AC025164.1-201ENST00000496249 478 ntBASIC6.46□□□□□ -1.38
ABCA3Q99758 RNU1-6P-201ENST00000516290 144 ntBASIC6.46□□□□□ -1.38
ABCA3Q99758 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.46□□□□□ -1.38
ABCA3Q99758 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.46□□□□□ -1.38
ABCA3Q99758 AC007224.1-201ENST00000564410 144 ntBASIC6.46□□□□□ -1.38
ABCA3Q99758 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.46□□□□□ -1.38
ABCA3Q99758 AC093227.2-201ENST00000589357 285 ntBASIC6.46□□□□□ -1.38
ABCA3Q99758 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.46□□□□□ -1.38
ABCA3Q99758 AC108359.1-201ENST00000616451 1211 ntBASIC6.46□□□□□ -1.38
ABCA3Q99758 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.46□□□□□ -1.38
ABCA3Q99758 TLK1P1-201ENST00000456760 2440 ntBASIC6.46□□□□□ -1.38
ABCA3Q99758 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
ABCA3Q99758 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ABCA3Q99758 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ABCA3Q99758 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.45□□□□□ -1.38
ABCA3Q99758 AC009643.2-201ENST00000603543 1448 ntBASIC6.45□□□□□ -1.38
ABCA3Q99758 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
ABCA3Q99758 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ABCA3Q99758 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ABCA3Q99758 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ABCA3Q99758 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
ABCA3Q99758 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
ABCA3Q99758 NRBF2P2-201ENST00000413087 861 ntBASIC6.45□□□□□ -1.38
ABCA3Q99758 AC009238.2-201ENST00000431026 355 ntBASIC6.45□□□□□ -1.38
ABCA3Q99758 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms