Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.72□□□□□ -1.17
HLA-CQ95604 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AC010680.4-201ENST00000605334 543 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.72□□□□□ -1.17
HLA-CQ95604 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.72□□□□□ -1.17
HLA-CQ95604 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC7.72□□□□□ -1.17
HLA-CQ95604 AL590396.3-201ENST00000636334 300 ntBASIC7.72□□□□□ -1.17
HLA-CQ95604 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
HLA-CQ95604 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
HLA-CQ95604 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
HLA-CQ95604 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-CQ95604 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-CQ95604 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
HLA-CQ95604 AC108467.2-201ENST00000617640 1597 ntBASIC7.71□□□□□ -1.17
HLA-CQ95604 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
HLA-CQ95604 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
HLA-CQ95604 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.71□□□□□ -1.17
HLA-CQ95604 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HLA-CQ95604 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HLA-CQ95604 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.71□□□□□ -1.17
HLA-CQ95604 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HLA-CQ95604 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.71□□□□□ -1.17
HLA-CQ95604 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.71□□□□□ -1.17
HLA-CQ95604 HDAC1P1-201ENST00000455482 1445 ntBASIC7.71□□□□□ -1.17
HLA-CQ95604 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HLA-CQ95604 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
HLA-CQ95604 AC074281.1-201ENST00000436419 2081 ntBASIC7.71□□□□□ -1.17
HLA-CQ95604 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC7.71□□□□□ -1.18
HLA-CQ95604 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.71□□□□□ -1.18
HLA-CQ95604 AC006600.2-201ENST00000624834 2506 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
HLA-CQ95604 SNRPEP3-201ENST00000338402 276 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 RNA5SP232-201ENST00000364144 119 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 Y_RNA.259-201ENST00000364619 101 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 SNORA70.8-201ENST00000384231 136 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
HLA-CQ95604 RPL23AP32-201ENST00000395315 459 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 RPL7P58-201ENST00000402913 758 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 COX6A1P3-201ENST00000404167 293 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 RN7SKP240-201ENST00000410583 375 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 RNU6-1068P-201ENST00000410958 103 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 RN7SKP108-201ENST00000411367 328 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 BEND7P1-201ENST00000422058 457 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-CQ95604 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-CQ95604 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC7.71□□□□□ -1.18
HLA-CQ95604 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-CQ95604 AC023347.2-201ENST00000433994 462 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.71□□□□□ -1.18
HLA-CQ95604 AC092809.1-201ENST00000441469 474 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-CQ95604 AL672138.1-201ENST00000450604 1015 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 BTF3P5-201ENST00000457252 467 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 RPL34P34-201ENST00000465389 354 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 AC104339.1-201ENST00000465478 348 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 AC015724.1-201ENST00000478577 156 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 AC015524.1-201ENST00000491585 472 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.71□□□□□ -1.18
HLA-CQ95604 PCBP2P3-201ENST00000509726 843 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 PGAM4P2-201ENST00000512491 721 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-CQ95604 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-CQ95604 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-CQ95604 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-CQ95604 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
HLA-CQ95604 AC011468.4-201ENST00000603942 409 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 AC073592.6-201ENST00000624271 415 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 AC009161.2-201ENST00000624626 138 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 TTK-211ENST00000627129 240 ntTSL 5 BASIC7.71□□□□□ -1.18
HLA-CQ95604 KRT7-214ENST00000638501 398 ntTSL 5 BASIC7.71□□□□□ -1.18
HLA-CQ95604 MIR193BHG-214ENST00000641765 509 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 AC097504.1-201ENST00000515103 2415 ntBASIC7.71□□□□□ -1.18
HLA-CQ95604 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
HLA-CQ95604 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
HLA-CQ95604 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms