Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 AC024940.3-201ENST00000538551 316 ntBASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 AC084759.1-201ENST00000561168 290 ntBASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 RNU6-84P-201ENST00000607737 102 ntBASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 AC073575.2-201ENST00000614212 627 ntBASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 AC108359.1-201ENST00000616451 1211 ntBASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 AF117829.2-201ENST00000619538 361 ntBASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 SCARNA15-201ENST00000607520 4325 ntBASIC4.07□□□□□ -1.76
TTC9CQ8N5M4 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC017079.1-201ENST00000333650 415 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 UBBP2-201ENST00000376781 231 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AL035079.1-201ENST00000405210 287 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC004980.3-201ENST00000447046 365 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AL645937.3-201ENST00000453647 936 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC011225.1-201ENST00000457751 369 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC024558.1-201ENST00000505008 528 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 ATP5LP3-201ENST00000514223 304 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC134349.2-201ENST00000535136 910 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC233280.2-201ENST00000603917 1070 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 IMMP1LP3-201ENST00000604197 224 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 BNIP3P35-201ENST00000604530 490 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 AC011493.1-201ENST00000596753 1632 ntBASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TTC9CQ8N5M4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 ADAM5-202ENST00000399789 1942 ntBASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 STX3-208ENST00000641815 3236 ntBASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 MAPK10-349ENST00000641767 3661 ntBASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 AC235565.1-201ENST00000456962 1325 ntBASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 SNORA17.1-201ENST00000362945 126 ntBASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 RN7SKP113-201ENST00000363891 295 ntBASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 MIR1286-201ENST00000408112 78 ntBASIC4.05□□□□□ -1.76
TTC9CQ8N5M4 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms