Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 PRPF19P1-201ENST00000584766 898 ntBASIC8.52□□□□□ -1.05
TOP2AP11388 AL049794.2-201ENST00000616301 365 ntBASIC8.52□□□□□ -1.05
TOP2AP11388 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
TOP2AP11388 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TOP2AP11388 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TOP2AP11388 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TOP2AP11388 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC8.52□□□□□ -1.05
TOP2AP11388 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TOP2AP11388 AC073365.1-203ENST00000641055 1992 ntBASIC8.52□□□□□ -1.05
TOP2AP11388 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TOP2AP11388 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TOP2AP11388 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
TOP2AP11388 AP005432.1-201ENST00000580891 3485 ntBASIC8.51□□□□□ -1.05
TOP2AP11388 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.51□□□□□ -1.05
TOP2AP11388 IGKV7-3-201ENST00000357453 298 ntBASIC8.51□□□□□ -1.05
TOP2AP11388 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TOP2AP11388 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
TOP2AP11388 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC8.51□□□□□ -1.05
TOP2AP11388 AC012519.1-201ENST00000424588 610 ntBASIC8.51□□□□□ -1.05
TOP2AP11388 YWHAZP2-201ENST00000440317 728 ntBASIC8.51□□□□□ -1.05
TOP2AP11388 RPSAP51-201ENST00000497462 645 ntBASIC8.51□□□□□ -1.05
TOP2AP11388 AC111000.6-201ENST00000514471 709 ntBASIC8.51□□□□□ -1.05
TOP2AP11388 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC8.51□□□□□ -1.05
TOP2AP11388 AP001781.1-201ENST00000530977 207 ntBASIC8.51□□□□□ -1.05
TOP2AP11388 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
TOP2AP11388 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TOP2AP11388 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TOP2AP11388 AL121890.3-201ENST00000618494 516 ntBASIC8.51□□□□□ -1.05
TOP2AP11388 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC8.51□□□□□ -1.05
TOP2AP11388 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC8.51□□□□□ -1.05
TOP2AP11388 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.51□□□□□ -1.05
TOP2AP11388 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
TOP2AP11388 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
TOP2AP11388 TLK1P1-201ENST00000456760 2440 ntBASIC8.51□□□□□ -1.05
TOP2AP11388 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TOP2AP11388 Z95114.1-201ENST00000624264 14574 ntBASIC8.51□□□□□ -1.05
TOP2AP11388 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
TOP2AP11388 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC8.5□□□□□ -1.05
TOP2AP11388 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TOP2AP11388 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.5□□□□□ -1.05
TOP2AP11388 UQCRBP1-201ENST00000421129 336 ntBASIC8.5□□□□□ -1.05
TOP2AP11388 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC8.5□□□□□ -1.05
TOP2AP11388 PPIAP21-201ENST00000464473 501 ntBASIC8.5□□□□□ -1.05
TOP2AP11388 OR11I1P-201ENST00000486033 954 ntBASIC8.5□□□□□ -1.05
TOP2AP11388 RNU1-6P-201ENST00000516290 144 ntBASIC8.5□□□□□ -1.05
TOP2AP11388 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC8.5□□□□□ -1.05
TOP2AP11388 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC8.5□□□□□ -1.05
TOP2AP11388 DERA-209ENST00000532964 854 ntTSL 5 BASIC8.5□□□□□ -1.05
TOP2AP11388 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.5□□□□□ -1.05
TOP2AP11388 AC133555.2-201ENST00000550213 292 ntBASIC8.5□□□□□ -1.05
TOP2AP11388 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC8.5□□□□□ -1.05
TOP2AP11388 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC8.5□□□□□ -1.05
TOP2AP11388 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC8.5□□□□□ -1.05
TOP2AP11388 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC8.5□□□□□ -1.05
TOP2AP11388 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TOP2AP11388 RMST-209ENST00000639542 3269 ntTSL 5 BASIC8.5□□□□□ -1.05
TOP2AP11388 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
TOP2AP11388 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TOP2AP11388 SOCS5P3-201ENST00000425115 1576 ntBASIC8.5□□□□□ -1.05
TOP2AP11388 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
TOP2AP11388 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
TOP2AP11388 NSF-206ENST00000575068 2667 ntTSL 2 BASIC8.5□□□□□ -1.05
TOP2AP11388 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC8.5□□□□□ -1.05
TOP2AP11388 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC8.5□□□□□ -1.05
TOP2AP11388 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOP2AP11388 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
TOP2AP11388 AC007618.1-201ENST00000366455 732 ntBASIC8.49□□□□□ -1.05
TOP2AP11388 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC8.49□□□□□ -1.05
TOP2AP11388 Z95152.1-201ENST00000453556 656 ntBASIC8.49□□□□□ -1.05
TOP2AP11388 RPL7AP52-201ENST00000458096 790 ntBASIC8.49□□□□□ -1.05
TOP2AP11388 AC011276.1-201ENST00000469688 323 ntBASIC8.49□□□□□ -1.05
TOP2AP11388 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC8.49□□□□□ -1.05
TOP2AP11388 ENPP7P11-201ENST00000505915 627 ntBASIC8.49□□□□□ -1.05
TOP2AP11388 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC8.49□□□□□ -1.05
TOP2AP11388 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
TOP2AP11388 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOP2AP11388 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TOP2AP11388 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.49□□□□□ -1.05
TOP2AP11388 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
TOP2AP11388 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TOP2AP11388 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TOP2AP11388 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC8.49□□□□□ -1.05
TOP2AP11388 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TOP2AP11388 AC006065.1-201ENST00000422539 802 ntBASIC8.49□□□□□ -1.05
TOP2AP11388 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC8.49□□□□□ -1.05
TOP2AP11388 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC8.49□□□□□ -1.05
TOP2AP11388 AC108751.3-201ENST00000461814 1020 ntBASIC8.49□□□□□ -1.05
TOP2AP11388 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
TOP2AP11388 RPL7AP10-201ENST00000481016 791 ntBASIC8.49□□□□□ -1.05
TOP2AP11388 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC8.49□□□□□ -1.05
TOP2AP11388 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC8.49□□□□□ -1.05
TOP2AP11388 AC100847.1-201ENST00000611316 481 ntBASIC8.49□□□□□ -1.05
TOP2AP11388 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC8.49□□□□□ -1.05
TOP2AP11388 AC004232.3-201ENST00000622977 525 ntBASIC8.49□□□□□ -1.05
TOP2AP11388 MIR6830-201ENST00000636015 70 ntBASIC8.49□□□□□ -1.05
TOP2AP11388 AL731532.1-201ENST00000623972 4236 ntBASIC8.48□□□□□ -1.05
TOP2AP11388 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TOP2AP11388 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.48□□□□□ -1.05
TOP2AP11388 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
TOP2AP11388 AP000756.2-201ENST00000624168 2567 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms