Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.68□□□□□ -1.5
PACSIN3Q9UKS6 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PACSIN3Q9UKS6 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.68□□□□□ -1.5
PACSIN3Q9UKS6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PACSIN3Q9UKS6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.68□□□□□ -1.5
PACSIN3Q9UKS6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 RNA5SP433-201ENST00000364491 114 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 LYPLA1P3-201ENST00000402650 695 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 SNORA11.3-201ENST00000408471 128 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 RPS26P4-201ENST00000431743 355 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC090018.1-201ENST00000434369 367 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 RPL5P7-201ENST00000444235 813 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 GYG1P1-201ENST00000460864 698 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC079080.1-201ENST00000479841 822 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 RPS12P31-201ENST00000491419 398 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC091951.3-201ENST00000504093 246 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 GOLGA5P1-201ENST00000507317 980 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC110775.1-201ENST00000513721 462 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 MTCO1P49-201ENST00000523429 802 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 OR4A17P-201ENST00000526032 904 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC090888.3-201ENST00000558917 509 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 NDUFA5P11-201ENST00000567995 343 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC090286.3-201ENST00000573133 187 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 MIR4801-201ENST00000582704 82 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 MIR4310-201ENST00000582950 57 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC079315.1-201ENST00000602952 623 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 RPSAP75-201ENST00000605848 301 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 PART1_2.1-201ENST00000612397 250 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 SNORA11.6-201ENST00000619030 128 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AL157770.1-201ENST00000623049 439 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC025262.3-201ENST00000623666 360 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AC092192.1-201ENST00000633154 1018 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 THAP12P9-201ENST00000503971 2360 ntBASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN3Q9UKS6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 IFIT1P1-201ENST00000400497 1449 ntBASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 AC104454.1-201ENST00000421341 1401 ntBASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 AL158152.1-201ENST00000602652 1435 ntBASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 MAPK10-328ENST00000641553 4009 ntBASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 GCNT1P4-201ENST00000404096 329 ntBASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 MIR1282-201ENST00000408865 101 ntBASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 RPS15AP30-201ENST00000420976 390 ntBASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 AC007679.3-201ENST00000434035 414 ntBASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 EXTL2P1-201ENST00000446218 416 ntBASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.66□□□□□ -1.5
PACSIN3Q9UKS6 RPS27AP8-201ENST00000452665 445 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms