Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AC007687.1-201ENST00000602704 304 ntBASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 AL360085.1-201ENST00000604713 532 ntBASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 AC122710.3-201ENST00000606566 541 ntBASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 AL031777.2-201ENST00000611953 196 ntBASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 AL365204.3-201ENST00000612448 685 ntBASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 AC093838.1-201ENST00000613014 469 ntBASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 MAPK10-290ENST00000641237 2826 ntBASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
LIMD1Q9UGP4 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.77□□□□□ -1.16
LIMD1Q9UGP4 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.77□□□□□ -1.16
LIMD1Q9UGP4 AL355488.2-201ENST00000609909 2850 ntBASIC7.77□□□□□ -1.16
LIMD1Q9UGP4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
LIMD1Q9UGP4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
LIMD1Q9UGP4 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RNU6-769P-201ENST00000384407 104 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 MIR555-201ENST00000384987 96 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 Z97832.1-201ENST00000402490 328 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RAD23BP1-201ENST00000421404 1227 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RPS24P8-201ENST00000431490 402 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 GTF2IP20-201ENST00000431663 360 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AC097527.1-201ENST00000437031 530 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RPL12P49-201ENST00000441100 121 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RPL17P49-201ENST00000443728 411 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 HMGN1P36-201ENST00000446623 298 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 MGAT2P1-201ENST00000449718 797 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RPL21P71-201ENST00000465598 459 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RPL23AP71-201ENST00000470966 469 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RN7SL849P-201ENST00000485236 295 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RN7SL655P-201ENST00000486087 298 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RN7SL518P-201ENST00000491887 280 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AC114967.1-201ENST00000504890 259 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 SNORA19.2-201ENST00000516013 114 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 SNORA81.2-201ENST00000516868 170 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AC090424.1-201ENST00000535243 736 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 MIR4800-201ENST00000537353 80 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AC090515.3-201ENST00000560431 315 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AC022884.3-201ENST00000579571 248 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AC019257.2-201ENST00000605539 497 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 Z98200.1-201ENST00000607298 470 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 RNU6-87P-201ENST00000607561 108 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AP001521.1-201ENST00000609150 300 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AL080312.2-201ENST00000613001 630 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 U1.34-201ENST00000618578 162 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AC015871.5-202ENST00000623252 701 ntBASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LIMD1Q9UGP4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms