Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AP001646.1-201ENST00000527936 915 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 DEFB108A-201ENST00000530110 222 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 DUX4L52-201ENST00000549363 777 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 AC091304.9-201ENST00000612091 226 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 AC073488.9-201ENST00000631601 754 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 SALL4P7-201ENST00000555779 3120 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 CYP2G2P-201ENST00000594920 1485 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CNTN3Q9P232 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CNTN3Q9P232 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 SNORA4.1-201ENST00000364263 144 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 MIR181A1-201ENST00000385026 110 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CNTN3Q9P232 MIR541-201ENST00000401360 84 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 ATG4AP1-201ENST00000416893 538 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AL359092.1-201ENST00000417156 265 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 HSPE1P16-201ENST00000426640 348 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC112492.2-201ENST00000432774 1030 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CNTN3Q9P232 B3GNT2P1-201ENST00000434960 952 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC242426.1-201ENST00000435270 960 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AL645939.3-201ENST00000435408 225 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 ARMC4P1-201ENST00000438905 707 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AL353093.1-201ENST00000441292 436 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC015983.1-201ENST00000441577 373 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 MTCO1P48-201ENST00000448024 1096 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 MTND5P20-201ENST00000448677 143 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC019084.1-201ENST00000457337 432 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 OR9M1P-201ENST00000459641 921 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 HMGB1P44-201ENST00000508597 572 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC114781.4-201ENST00000513707 639 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC092718.4-201ENST00000566639 716 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC139493.1-201ENST00000604368 397 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC063943.3-201ENST00000615562 356 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AL357080.1-201ENST00000617394 239 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC241377.1-201ENST00000619797 406 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC089999.3-201ENST00000622440 577 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 LINC01739-205ENST00000641890 573 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CNTN3Q9P232 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CNTN3Q9P232 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CNTN3Q9P232 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CNTN3Q9P232 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CNTN3Q9P232 ELF2P3-201ENST00000445099 1506 ntBASIC7.16□□□□□ -1.26
CNTN3Q9P232 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CNTN3Q9P232 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms