Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 MTCO1P15-201ENST00000529569 1526 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AL033543.1-201ENST00000623440 13454 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AC016831.4-201ENST00000438302 307 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AC074101.1-201ENST00000637861 241 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AL359955.1-201ENST00000455242 3275 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AC125257.1-201ENST00000560400 2930 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 LPP-208ENST00000448637 5835 ntTSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 FABP7P1-201ENST00000424004 391 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 RPL23AP56-201ENST00000460778 453 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 OR2A3P-201ENST00000493774 953 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AL590240.1-201ENST00000334118 313 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 MIR589-201ENST00000385238 99 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 CYCSP19-201ENST00000411715 316 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AC114755.5-201ENST00000447760 831 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AC023424.1-201ENST00000496058 459 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AC093840.1-201ENST00000511599 336 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 ENPP7P9-201ENST00000514456 627 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AL139041.1-201ENST00000605480 610 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 CYP1D1P-201ENST00000416662 1433 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 OR4K17-201ENST00000315543 1032 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 RN7SKP186-201ENST00000365371 303 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AL158073.1-201ENST00000426848 1104 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 SLC25A18P1-201ENST00000449385 454 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AC041039.1-201ENST00000485656 536 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 RPSAP51-201ENST00000497462 645 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 SAP18P1-201ENST00000512058 390 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 KPNA2P3-201ENST00000584190 848 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 PCA3_2.1-201ENST00000612507 409 ntBASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALMS1Q8TCU4 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 AP000756.2-201ENST00000624168 2567 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 RPL23AP59-201ENST00000399415 461 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 OR1H1P-201ENST00000448731 937 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 AC007497.1-201ENST00000610421 561 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 AC100847.1-201ENST00000611316 481 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 CASC19-255ENST00000641733 1385 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms