Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CRLF3Q8IUI8 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CRLF3Q8IUI8 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CRLF3Q8IUI8 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 MTHFD2P5-201ENST00000320415 844 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 RNU1-74P-201ENST00000384108 171 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 RNU1-77P-201ENST00000390868 162 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AC013442.1-201ENST00000397347 228 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 MIR1286-201ENST00000408112 78 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 U3.32-201ENST00000408116 212 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 MIR1271-201ENST00000408537 86 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 RPL36AP10-201ENST00000421785 322 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AL031584.1-201ENST00000447169 754 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 RPL7P45-201ENST00000455851 743 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 RNU7-157P-201ENST00000459600 66 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AC026348.1-201ENST00000462549 1053 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AC073073.1-201ENST00000493920 463 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 RN7SL447P-201ENST00000494711 245 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AC138938.1-201ENST00000515431 782 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AC078878.1-201ENST00000539832 958 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 YWHABP2-201ENST00000540201 713 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AL451049.1-201ENST00000608672 497 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AC000068.2-201ENST00000608816 460 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AC136428.4-201ENST00000634254 1155 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AC235565.1-201ENST00000456962 1325 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 AC007342.5-201ENST00000571340 2142 ntBASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CRLF3Q8IUI8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 PCAT14-202ENST00000627127 3935 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AC104260.2-201ENST00000623551 3497 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 SEPT7P2-202ENST00000398921 823 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AL359643.1-201ENST00000404109 423 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 RPL7L1P9-201ENST00000431298 745 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AC105399.1-202ENST00000447303 205 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AC093166.2-201ENST00000455969 1017 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 GYG1P1-201ENST00000460864 698 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 RN7SL799P-201ENST00000475891 298 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 RPL7P39-201ENST00000481157 744 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 RPL7P40-201ENST00000481703 745 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 RPS4XP1-201ENST00000482189 787 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AGGF1P9-201ENST00000561884 913 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AC016180.1-201ENST00000567945 403 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 BX323046.1-201ENST00000610145 535 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 Z95327.3-201ENST00000610385 572 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 OR8G7P-201ENST00000616658 848 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AC118658.2-201ENST00000618697 459 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AC008115.4-201ENST00000619780 775 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AC022106.2-201ENST00000620114 757 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 SAMMSON-209ENST00000641222 1100 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 AC068870.3-201ENST00000625077 2536 ntBASIC5.11□□□□□ -1.59
CRLF3Q8IUI8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CRLF3Q8IUI8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
CRLF3Q8IUI8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.1□□□□□ -1.59
CRLF3Q8IUI8 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms