Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RN7SKP66-201ENST00000516681 231 ntBASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 AC069307.1-201ENST00000602820 447 ntBASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 OR7M1P-201ENST00000608946 533 ntBASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 AC131971.1-201ENST00000332881 1482 ntBASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NPIPA1Q9UND3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NPIPA1Q9UND3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.9□□□□□ -1.62
NPIPA1Q9UND3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NPIPA1Q9UND3 AC083899.1-201ENST00000454465 3819 ntBASIC4.9□□□□□ -1.62
NPIPA1Q9UND3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.9□□□□□ -1.62
NPIPA1Q9UND3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NPIPA1Q9UND3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NPIPA1Q9UND3 OR9K1P-202ENST00000641111 3217 ntBASIC4.9□□□□□ -1.62
NPIPA1Q9UND3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
NPIPA1Q9UND3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
NPIPA1Q9UND3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NPIPA1Q9UND3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.9□□□□□ -1.62
NPIPA1Q9UND3 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AL353625.1-202ENST00000366273 571 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 RNU1-106P-201ENST00000384382 164 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 PPIAP9-201ENST00000403866 498 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 OR4K12P-201ENST00000406538 961 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AL354766.1-201ENST00000423396 542 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC093655.2-201ENST00000425735 631 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 MTCO1P51-201ENST00000427672 1060 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 FCF1P7-201ENST00000451185 558 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 MTND6P32-201ENST00000457611 483 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 SEPT14P1-201ENST00000458703 648 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 RN7SL97P-201ENST00000486780 299 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 SNRPCP2-201ENST00000504370 475 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC021106.1-201ENST00000509020 1058 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC091912.1-201ENST00000511351 248 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 NPM1P52-201ENST00000518264 846 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 OR4A43P-201ENST00000532938 908 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC005341.1-201ENST00000571086 708 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 MIR4700-201ENST00000578311 74 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC006272.2-201ENST00000594725 163 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC116651.1-201ENST00000609724 556 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC010632.3-201ENST00000611377 369 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC243960.7-201ENST00000623532 707 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AC073869.8-201ENST00000641806 335 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 OR55B1P-203ENST00000641518 2602 ntBASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA1Q9UND3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 AL353796.1-201ENST00000561542 3241 ntBASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA1Q9UND3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms