Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC016559.2-201ENST00000510759 359 ntBASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 SNORA70.17-201ENST00000516449 133 ntBASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 RNA5SP230-201ENST00000517039 122 ntBASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 IGLVIV-64-201ENST00000518581 301 ntBASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 IGKV3D-34-201ENST00000522638 302 ntBASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 OR7E10P-201ENST00000526420 991 ntBASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 BLZF2P-201ENST00000553776 1130 ntBASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 NMNAT1P5-201ENST00000559657 841 ntBASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 SNORD95-201ENST00000579879 68 ntBASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 AC244107.2-201ENST00000611773 76 ntBASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 AL445437.1-201ENST00000623157 3087 ntBASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA9Q9UGM1 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 MIR133B-201ENST00000362210 119 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 RNU6-386P-201ENST00000362650 107 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 RNA5SP435-201ENST00000364044 108 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 RNU6-819P-201ENST00000364116 107 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 OR1L6-202ENST00000373684 1044 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 GABARAPL3-201ENST00000412799 354 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AP000936.3-201ENST00000438127 255 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 GAPDHP25-201ENST00000447061 1001 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 CALM1P2-201ENST00000452941 448 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AL035090.1-201ENST00000454835 332 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AC037198.2-201ENST00000478845 733 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 LARP7P4-201ENST00000481075 878 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 RN7SL447P-201ENST00000494711 245 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AL136038.1-201ENST00000497246 351 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 snoU109.6-201ENST00000516831 118 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 MTCYBP13-201ENST00000578634 1093 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 MIR4660-201ENST00000583549 74 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 NXF4-202ENST00000416098 1465 ntBASIC4.88□□□□□ -1.63
CHRNA9Q9UGM1 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC079298.1-201ENST00000625026 1619 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 RNA5SP335-201ENST00000363817 110 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AL133388.1-201ENST00000404509 287 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 RNA5SP487-201ENST00000410186 122 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms