Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC85AQ96PX6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CCDC85AQ96PX6 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC85AQ96PX6 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.13□□□□□ -1.11
CCDC85AQ96PX6 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC85AQ96PX6 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.13□□□□□ -1.11
CCDC85AQ96PX6 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.13□□□□□ -1.11
CCDC85AQ96PX6 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC8.13□□□□□ -1.11
CCDC85AQ96PX6 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 AC005261.2-201ENST00000593427 4258 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 SMG1P5-202ENST00000529428 4219 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 SMG1P2-201ENST00000566127 4221 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 Y_RNA.18-201ENST00000362461 102 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 Y_RNA.813-201ENST00000364639 102 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 RN7SKP237-201ENST00000364663 301 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 NRBF2P2-201ENST00000413087 861 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 AL035422.1-201ENST00000414193 397 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 MTCO1P3-201ENST00000429327 192 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 MTCO3P18-201ENST00000440206 761 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 EPS15P1-201ENST00000448836 336 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 MTND3P10-201ENST00000450967 341 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 RPL23AP37-201ENST00000479658 549 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 ATP5F1P7-201ENST00000567330 760 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 AP005262.1-201ENST00000582646 997 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 AC011374.2-201ENST00000607135 526 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 MRPL57P1-201ENST00000621486 265 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 AC138393.1-206ENST00000540997 1886 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 ELF2P3-201ENST00000445099 1506 ntBASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC85AQ96PX6 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 CASC19-246ENST00000641625 1606 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AL139384.2-201ENST00000613809 3590 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 STAG3L4-201ENST00000352103 530 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 SUGT1P2-201ENST00000379452 992 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 RN7SKP281-201ENST00000410472 352 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 RN7SKP240-201ENST00000410583 375 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AL359092.1-201ENST00000417156 265 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AC245054.1-201ENST00000420944 258 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AC007435.1-201ENST00000421086 415 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 DDX39BP2-208ENST00000453923 258 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 DNAJC19P1-201ENST00000455312 319 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AC104849.1-201ENST00000462623 405 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 RPL23AP64-201ENST00000469465 435 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 RN7SL561P-201ENST00000488553 281 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AC063943.2-201ENST00000495697 534 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 OR5H5P-201ENST00000503164 928 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AC006499.5-201ENST00000505037 514 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 HSPE1P23-201ENST00000509838 286 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 HMGB3P13-201ENST00000511263 607 ntBASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC85AQ96PX6 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms