Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.36□□□□□ -1.23
FOXR1Q6PIV2 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
FOXR1Q6PIV2 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
FOXR1Q6PIV2 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
FOXR1Q6PIV2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
FOXR1Q6PIV2 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.36□□□□□ -1.23
FOXR1Q6PIV2 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
FOXR1Q6PIV2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 MTND5P1-201ENST00000445440 1375 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AL136531.3-201ENST00000624378 3658 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AC138393.1-206ENST00000540997 1886 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 DDX50P1-201ENST00000438163 2400 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 RNU6-574P-201ENST00000384265 107 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 SNORA40.3-201ENST00000390964 122 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AC104297.1-201ENST00000393779 870 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AC017035.1-201ENST00000411999 1115 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 USP9YP27-201ENST00000418455 438 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AC092647.1-201ENST00000420654 287 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 RPL29P7-201ENST00000440227 457 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 MRPS21P1-201ENST00000453850 223 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AC008620.1-201ENST00000468453 592 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 RPS7P6-201ENST00000485777 579 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 RN7SL776P-201ENST00000493390 268 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 RN7SL131P-201ENST00000579043 256 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AP001542.2-201ENST00000593141 364 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AC108451.2-201ENST00000603875 538 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AC024085.1-201ENST00000604299 432 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AL139286.1-201ENST00000604465 483 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AL136139.1-201ENST00000605568 222 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AC087821.2-201ENST00000637086 450 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 IFIT1P1-201ENST00000400497 1449 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 KYNUP1-201ENST00000466683 1406 ntBASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
FOXR1Q6PIV2 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 RNU6-877P-201ENST00000383868 107 ntBASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 RN7SKP85-201ENST00000411349 318 ntBASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 RPS21P8-201ENST00000413365 247 ntBASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 RPL26P29-201ENST00000415623 438 ntBASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 NUP35P1-201ENST00000422734 947 ntBASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 GSTA6P-201ENST00000424144 582 ntBASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 DEFA9P-201ENST00000433042 285 ntBASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 RPS25P9-201ENST00000435591 252 ntBASIC7.34□□□□□ -1.23
FOXR1Q6PIV2 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms