Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-2O95096 MTCO1P7-201ENST00000419523 1542 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 MTCO1P15-201ENST00000529569 1526 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 AC144833.1-201ENST00000567953 4089 ntBASIC5.13□□□□□ -1.59
NKX2-2O95096 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 AC087516.1-201ENST00000561236 2428 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-2O95096 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 RN7SKP6-201ENST00000364795 319 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
NKX2-2O95096 RNU6-532P-201ENST00000384318 107 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 RNA5SP122-201ENST00000384457 108 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 RNU6-1257P-201ENST00000384625 110 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NKX2-2O95096 RNU6-244P-201ENST00000391028 104 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
NKX2-2O95096 RPS27AP11-201ENST00000402798 447 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 SDHDP6-201ENST00000414693 480 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AL133482.1-201ENST00000415988 498 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 MTND2P15-201ENST00000418575 892 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AL035458.1-201ENST00000433096 585 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 NPM1P18-201ENST00000434232 732 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 FMO7P-201ENST00000436045 768 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AC064862.4-201ENST00000442180 334 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX2-2O95096 RN7SL72P-201ENST00000460697 269 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 ATP5G1P3-201ENST00000463301 410 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-2O95096 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.12□□□□□ -1.59
NKX2-2O95096 NAMPTP2-201ENST00000505629 1115 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AC119751.4-201ENST00000507498 357 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AC091912.1-201ENST00000511351 248 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 RNU5A-7P-201ENST00000515979 116 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.12□□□□□ -1.59
NKX2-2O95096 BUD31P1-201ENST00000521828 359 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AC079064.1-201ENST00000528365 362 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-2O95096 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-2O95096 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AP002373.2-201ENST00000541631 1060 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.12□□□□□ -1.59
NKX2-2O95096 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AL109741.3-201ENST00000561748 592 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.12□□□□□ -1.59
NKX2-2O95096 RBM22P12-201ENST00000567098 1255 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX2-2O95096 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AP003117.1-201ENST00000602771 554 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.12□□□□□ -1.59
NKX2-2O95096 AC011458.1-201ENST00000604034 617 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AC021851.1-201ENST00000608537 1082 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AP005229.2-201ENST00000609980 697 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AL391834.2-201ENST00000609982 546 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AC008115.3-201ENST00000614874 549 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 AP004607.9-201ENST00000618202 316 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX2-2O95096 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 SAMMSON-210ENST00000641260 1308 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-2O95096 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX2-2O95096 RBPJP2-201ENST00000618187 1444 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX2-2O95096 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-2O95096 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.12□□□□□ -1.59
NKX2-2O95096 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
NKX2-2O95096 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NKX2-2O95096 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NKX2-2O95096 AP005432.1-201ENST00000580891 3485 ntBASIC5.11□□□□□ -1.59
NKX2-2O95096 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-2O95096 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-2O95096 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms